RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 MINDY2Q8NBR6 621 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 OR1L1Q8NH94 360 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 CORO2AQ92828 525 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 RAB9BQ9NP90 201 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
VRK3-212ENST00000596814 DIRAS3O95661 229 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 SPNP16150 400 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 IL2RGP31785 369 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 PLA1AQ53H76 456 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 CENPSQ8N2Z9 138 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 GALMQ96C23 342 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 GINS4Q9BRT9 223 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 COPZ2Q9P299 210 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 SLC23A1Q9UHI7 598 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 PHF1O43189 567 aaPredicted RBP12.1□□□□□ -0.47
VRK3-212ENST00000596814 RBMS2Q15434 407 aaKnown RBP12.1□□□□□ -0.47
VRK3-212ENST00000596814 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 OR6F1Q8NGZ6 308 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
VRK3-212ENST00000596814 GAL3ST2Q9H3Q3 398 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 TAS2R3Q9NYW6 316 aa12.1□□□□□ -0.47
VRK3-212ENST00000596814 IGHV4-61A0A0C4DH41 118 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 KBTBD11-OT1A0A1B0GTJ5 212 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 NPIPB11E5RHQ5 1161 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 HSPA12AO43301 675 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 CGB3P0DN86 165 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 CGB7P0DN87 165 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 SLC25A16P16260 332 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 NFYAP23511 347 aaPredicted RBP12.09□□□□□ -0.47
VRK3-212ENST00000596814 FCGR2CP31995 323 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 LMO4P61968 165 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 ZNF660Q6AZW8 331 aaPredicted RBP12.09□□□□□ -0.47
VRK3-212ENST00000596814 PLET1Q6UQ28 207 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 CCBE1Q6UXH8 406 aaPredicted RBP12.09□□□□□ -0.47
VRK3-212ENST00000596814 DUSP18Q8NEJ0 188 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 RFESDQ8TAC1 157 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 C8orf46Q8TAG6 207 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 OR1A1Q9P1Q5 309 aa12.09□□□□□ -0.47
VRK3-212ENST00000596814 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
VRK3-212ENST00000596814 F2RL2O00254 374 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 NDUFB6O95139 128 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 TCRBP04435 133 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 CCL3L1P16619 93 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 ZBTB25P24278 435 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 HTD2P86397 168 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 C11orf91Q3C1V1 193 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 Q5PR19 223 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 DHRS11Q6UWP2 260 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 LHFPL1Q86WI0 220 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 OR13C8Q8NGS7 320 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 SLC25A21Q9BQT8 299 aaPredicted RBP12.08□□□□□ -0.47
VRK3-212ENST00000596814 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 MMP28Q9H239 520 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 ZNF69Q9UC07 566 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.47
VRK3-212ENST00000596814 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
VRK3-212ENST00000596814 CSMD2Q7Z408 3487 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 A8MXK9 166 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 C22orf46C9J442 243 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 HEXAP06865 529 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 ZNF728P0DKX0 622 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 OMGP23515 440 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 LTC4SQ16873 150 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 CD276Q5ZPR3 534 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
VRK3-212ENST00000596814 TERB2Q8NHR7 220 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 UPRTQ96BW1 309 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 C20orf85Q9H1P6 137 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 LINC00574Q9H8X3 128 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 IDI2-AS1Q9NZ38 188 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 JPT1Q9UK76 154 aa12.08□□□□□ -0.48
VRK3-212ENST00000596814 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 KIAA1324LA8MWY0 1029 aaPredicted RBP12.07□□□□□ -0.48
VRK3-212ENST00000596814 TUSC2O75896 110 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 PPYP01298 95 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 PPIAL4GP0DN37 164 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 AADACP22760 399 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 FPR2P25090 351 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 HERV-K104P61576 105 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 GNMTQ14749 295 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 TMEM30BQ3MIR4 351 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms