RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NHLRC3Q5JS37 347 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 KRBOX4Q5JUW0 171 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 SLC35E3Q7Z769 313 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 CORO2AQ92828 525 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 METTL9Q9H1A3 318 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 PPIL3Q9H2H8 161 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 VCX3BQ9H321 246 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 GAL3ST2Q9H3Q3 398 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF286AQ9HBT8 521 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 SCN3BQ9NY72 215 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF581Q9P0T4 197 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 LY6LH3BQJ8 138 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 BUB1B-PAK6H3BSN5 160 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 SERPINA2P20848 420 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 CDX1P47902 265 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 RBM11P57052 281 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 RBM39Q14498 530 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 IRF3Q14653 427 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 PAN3Q58A45 887 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 DRAM1Q8N682 238 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF596Q8TC21 504 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 ING3Q9NXR8 418 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 TAS2R3Q9NYW6 316 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 ING4Q9UNL4 249 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 ST3GAL6Q9Y274 331 aa10.71□□□□□ -0.69
SHKBP1-208ENST00000595726 A0A1W2PP11 408 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A18PA6NE21 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A16PA6NEW6 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A20PA6NIJ5 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A9PA6NNJ1 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A12PA8MX19 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A5PA8MXJ8 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 LDLRAD4O15165 306 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 IGHG2P01859 326 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 CSTBP04080 98 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 MAS1P04201 325 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A15PP0C7V4 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A13PP0C7W8 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A14PP0C7W9 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM90A24PP0C7X0 464 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 CDK2P24941 298 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 MNDAP41218 407 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 HSPA13P48723 471 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 PAX5Q02548 391 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 FHL3Q13643 280 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 INSL4Q14641 139 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 SPHARQ15513 63 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 PNLIPRP3Q17RR3 467 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 CXorf66Q5JRM2 361 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 HEPN1Q6WQI6 88 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 LYPD6Q86Y78 171 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 JAGN1Q8N5M9 183 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 OR56B4Q8NH76 319 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 PLPPR1Q8TBJ4 325 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 THRSPQ92748 146 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 S100A13Q99584 98 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 DUSP21Q9H596 190 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 IFT22Q9H7X7 185 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 TPRKBQ9Y3C4 175 aa10.7□□□□□ -0.7
SHKBP1-208ENST00000595726 ZNF729A6NN14 1252 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 CCRL2O00421 344 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 GEMIN2O14893 280 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 ZNF780AO75290 641 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 OR7C1O76099 320 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 GP9P14770 177 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 CEACAM3P40198 252 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 INSL3P51460 131 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 GPR50Q13585 617 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 HES1Q14469 280 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 MED22Q15528 200 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 SRSF7Q16629 238 aaKnown RBP eCLIP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 C17orf58Q2M2W7 97 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 RSBN1Q5VWQ0 802 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 FAM53AQ6NSI3 398 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 RTN4RL2Q86UN3 420 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 FOXRED2Q8IWF2 684 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 NKAIN3Q8N8D7 197 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 SUMF2Q8NBJ7 301 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 MUL1Q969V5 352 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 OR6C3Q9NZP0 311 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 KIF25Q9UIL4 384 aa10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 MRPS28Q9Y2Q9 187 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-208ENST00000595726 MEIKINA0A087WXM9 373 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 TOR1AO14656 332 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 RGS10O43665 173 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 SC5DO75845 299 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 CGB3P0DN86 165 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 CGB7P0DN87 165 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 GTF2F2P13984 249 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 TMEM11P17152 192 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 CRHBPP24387 322 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms