RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FAM90A10PA6NDY2 464 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 FAM90A7PA6NKC0 464 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 FAM90A23PA8MXZ1 464 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 PTGES3LE9PB15 166 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 SPINT2O43291 252 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 FGF16O43320 207 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 REG1BP48304 166 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 ACSM3Q53FZ2 586 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 RNLSQ5VYX0 342 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 FAM53AQ6NSI3 398 aaPredicted RBP18.63■□□□□ 0.57
LSM4-204ENST00000594828 MS4A15Q8N5U1 240 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 C5orf56Q8N8D9 126 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 MND1Q9BWT6 205 aa18.63■□□□□ 0.57
LSM4-204ENST00000594828 C12orf77C9JDV5 145 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 PRB2P02812 416 aaPredicted RBP18.62■□□□□ 0.57
LSM4-204ENST00000594828 CD33P20138 364 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 FUT3P21217 361 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 IL3RAP26951 378 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 VHLP40337 213 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 Q3ZCU0 254 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 C6orf141Q5SZD1 244 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 C6orf183Q5T699 404 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 UNQ9370/PRO34162Q6UXP9 181 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 GAPTQ8N292 157 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 WFDC9Q8NEX5 89 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 Q96M66 194 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 GHRLQ9UBU3 117 aa18.62■□□□□ 0.57
LSM4-204ENST00000594828 PSMB11A5LHX3 300 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 CA11O75493 328 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 GLAP06280 429 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 GABPB1Q06547 395 aaPredicted RBP18.61■□□□□ 0.57
LSM4-204ENST00000594828 GPR50Q13585 617 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 EBI3Q14213 229 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 INSL4Q14641 139 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 KHDC1LQ5JSQ8 128 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 REC114Q7Z4M0 266 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 SCN3BQ9NY72 215 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 GNG12Q9UBI6 72 aa18.61■□□□□ 0.57
LSM4-204ENST00000594828 NKX1-2Q9UD57 310 aaPredicted RBP18.61■□□□□ 0.57
LSM4-204ENST00000594828 IGHV3-72A0A0B4J1Y9 119 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 UBE2QL1A1L167 161 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 H0YHG0 523 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 SC5DO75845 299 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 HBZP02008 142 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 TMEM30BQ3MIR4 351 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 SIGIRRQ6IA17 410 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 TRAT1Q6PIZ9 186 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 PRR18Q8N4B5 295 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 SGCDQ92629 289 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 ST6GALNAC6Q969X2 333 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 FAM46BQ96A09 425 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 EAF1Q96JC9 268 aaPredicted RBP18.6■□□□□ 0.57
LSM4-204ENST00000594828 TMED9Q9BVK6 235 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 CST11Q9H112 138 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 TGP01266 2768 aa18.6■□□□□ 0.57
LSM4-204ENST00000594828 PF4P02776 101 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 RCC1P18754 421 aaPredicted RBP18.59■□□□□ 0.57
LSM4-204ENST00000594828 SPHARQ15513 63 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 SLC25A48Q6ZT89 311 aaKnown RBP18.59■□□□□ 0.57
LSM4-204ENST00000594828 ZNF329Q86UD4 541 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 OR2T10Q8NGZ9 312 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 OR1L1Q8NH94 360 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 CHPT1Q8WUD6 406 aa18.59■□□□□ 0.57
LSM4-204ENST00000594828 RTN4IP1Q8WWV3 396 aaPredicted RBP18.59■□□□□ 0.57
LSM4-204ENST00000594828 PRKDCP78527 4128 aaKnown RBP18.59■□□□□ 0.57
LSM4-204ENST00000594828 NCBP2LA6PVI3 153 aaKnown RBP18.58■□□□□ 0.56
LSM4-204ENST00000594828 SERPINE3A8MV23 424 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 SLC31A2O15432 143 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 PDCD6O75340 191 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 ZNF134P52741 427 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 GP2P55259 537 aaKnown RBP18.58■□□□□ 0.56
LSM4-204ENST00000594828 MED22Q15528 200 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 FAM27D1Q5T7N8 215 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 GLT8D1Q68CQ7 371 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 SLC35E3Q7Z769 313 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 IZUMO1Q8IYV9 350 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 ZNF439Q8NDP4 499 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 OR10V1Q8NGI7 309 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 NOL4LQ96MY1 436 aaPredicted RBP18.58■□□□□ 0.56
LSM4-204ENST00000594828 TAF9BQ9HBM6 251 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 KCNIP1Q9NZI2 227 aa18.58■□□□□ 0.56
LSM4-204ENST00000594828 LSM2Q9Y333 95 aaKnown RBP18.58■□□□□ 0.56
LSM4-204ENST00000594828 MPIG6BO95866 241 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 IGHG2P01859 326 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 UBBP0CG47 229 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 IGLL1P15814 213 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 CD1BP29016 333 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 CT45A1Q5HYN5 189 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 RBM48Q5RL73 367 aaKnown RBP18.57■□□□□ 0.56
LSM4-204ENST00000594828 CEACAM19Q7Z692 300 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 LRRTM1Q86UE6 522 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 TGIF2LXQ8IUE1 241 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 Q8N6K4 173 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 CT45A3Q8NHU0 189 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 PHYHIPQ92561 330 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 PHF21AQ96BD5 680 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 MBNL3Q9NUK0 354 aaKnown RBP18.57■□□□□ 0.56
LSM4-204ENST00000594828 NECAP2Q9NVZ3 263 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 LINC00527Q9UJ94 153 aa18.57■□□□□ 0.56
LSM4-204ENST00000594828 TXNL1O43396 289 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms