RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CXCL13O43927 109 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 IFNA5P01569 189 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 F2RP25116 425 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 P4HA3Q7Z4N8 544 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 YRDCQ86U90 279 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 ADGRG7Q96K78 797 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 FAM210BQ96KR6 192 aa12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 FGF23Q9GZV9 251 aaPredicted RBP12.71□□□□□ -0.38
SMARCA4-219ENST00000592604 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 IL11RAQ14626 422 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 SPEM1Q8N4L4 309 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 AGBL5Q8NDL9 886 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 CPEB3Q8NE35 698 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 GPR146Q96CH1 333 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 RAB40CQ96S21 281 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 A0A0G2JRQ6 117 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 ATXN7O15265 892 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 NXPH3O95157 252 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 WNT2P09544 360 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 TRGC1P0CF51 173 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 PI4KAP42356 2102 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 RCC1LQ96I51 464 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 RPRMQ9NS64 109 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 CHTOPQ9Y3Y2 248 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 NCKAP5O14513 1909 aa12.7□□□□□ -0.38
SMARCA4-219ENST00000592604 CLDN34H7C241 214 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 PHOX2AO14813 284 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 GDF9O60383 454 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 CYB5R3P00387 301 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 BCL2P10415 239 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 NRN1LQ496H8 165 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 OR2T2Q6IF00 324 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 OR56B2PQ8NGI1 322 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 FRZBQ92765 325 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 GNG13Q9P2W3 67 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 A6NJY4 79 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 RAB11AP62491 216 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 PRDX4Q13162 271 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 MTCH1Q9NZJ7 389 aa12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 TNRC6AQ8NDV7 1962 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-219ENST00000592604 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 OR10D3Q8NH80 312 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 SAP25Q8TEE9 199 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 P2RX4Q99571 388 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 PSMG3Q9BT73 122 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 SDF2L1Q9HCN8 221 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 RNF150Q9ULK6 438 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 A0A0G2JMM0 328 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 A0A1W2PPB8 328 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 A0A1W2PRS3 328 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 KIR3DP1A8MWS1 328 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 TNFSF12O43508 249 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 S100GP29377 79 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 CEACAM21Q3KPI0 293 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 ZNF324BQ6AW86 544 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 ZNF787Q6DD87 383 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 ETFRF1Q6IPR1 90 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 SLC25A24Q6NUK1 477 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 MRPL30Q8TCC3 161 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 ZNF576Q9H609 170 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 ZNF665Q9H7R5 613 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 IL36RNQ9UBH0 155 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 WNT16Q9UBV4 365 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 OR2W1Q9Y3N9 320 aa12.68□□□□□ -0.38
SMARCA4-219ENST00000592604 CYTIPO60759 359 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 RAB4AP20338 218 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 GPM6AP51674 278 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 ZNF726P1Q15940 193 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 MKXQ8IYA7 352 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 SCGB1C1Q8TD33 95 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 CRIM1Q9NZV1 1036 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 TRAPPC2LH3BP13 241 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 NEK7Q8TDX7 302 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 LSM10Q969L4 123 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 TMEM45BQ96B21 275 aa12.67□□□□□ -0.38
SMARCA4-219ENST00000592604 RSG1Q9BU20 258 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms