RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 SZT2Q5T011 3432 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 KIF26BQ2KJY2 2108 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 TMED7-TICAM2A0A0A6YYA0 188 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 FAM230AA0A1W2PPH8 454 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 LMX1BO60663 402 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 OR10J4P0C629 311 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 GFERP55789 205 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 BAXQ07812 192 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 RAB31Q13636 194 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 ADIRFQ15847 76 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 SGCBQ16585 318 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 OR4P4Q8NGL7 312 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 CACNG8Q8WXS5 425 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 SPSB1Q96BD6 273 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 RBMXL1Q96E39 390 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 MMP17Q9ULZ9 603 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 CDS2O95674 445 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 BGLAPP02818 100 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 H2BFMP0C1H6 154 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 CLDN6P56747 220 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 FMODQ06828 376 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 CALHM1Q8IU99 346 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 PARLQ9H300 379 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 ZNF160Q9HCG1 818 aa10.59□□□□□ -0.71
SMARCA4-217ENST00000591595 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 EML5Q05BV3 1969 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 IGHV2-26A0A0B4J1V2 119 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 WISP1O95388 367 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 HRASP01112 189 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 CD99P14209 185 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 ZNF43P17038 809 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 GNMTQ14749 295 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 PCK2Q16822 640 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 C1orf140Q5VVS0 124 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 C20orf196Q8IYI0 205 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 TXNIPQ9H3M7 391 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 HS3ST3A1Q9Y663 406 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 SPTY2D1-AS1A0A0U1RR47 76 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 CD1BP29016 333 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 PHF19Q5T6S3 580 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 BATF2Q8N1L9 274 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 DEFB119Q8N690 84 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 POLR1DQ9Y2S0 133 aa10.58□□□□□ -0.72
SMARCA4-217ENST00000591595 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 NPIPA5E9PKD4 350 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 HLA-DOBP13765 273 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 GABRG2P18507 467 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 KRTDAPP60985 99 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 IGF2-ASQ6U949 168 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 OR1B1Q8NGR6 318 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 KLHDC7BQ96G42 594 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 SPACA5Q96QH8 159 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 COPS7AQ9UBW8 275 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 NPIPA1Q9UND3 350 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 R4GMQ9 66 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 LOC102723971A0A1B0GUV8 181 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 MT-ATP6P00846 226 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 MRGPRGQ86SM5 289 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 PNKDQ8N490 385 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 TRANK1O15050 2925 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 IGLV1-36A0A0B4J1U3 117 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 IGHV5-51A0A0C4DH38 117 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 FRG2CA6NGY1 282 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 TYMSP04818 313 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 MLF1P58340 268 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 ROM1Q03395 351 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 RAET1LQ5VY80 246 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 ARHGEF39Q8N4T4 335 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 TMEM217Q8N7C4 229 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 LMX1AQ8TE12 382 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 GPR132Q9UNW8 380 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 TRAPPC1Q9Y5R8 145 aa10.57□□□□□ -0.72
SMARCA4-217ENST00000591595 REV3LO60673 3130 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 CLPSP04118 112 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 HERV-K104P63124 156 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 RLN3Q8WXF3 142 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 PSMF1Q92530 271 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 C8orf44Q96CB5 159 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 RTBDNQ9BSG5 229 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 HIF1ANQ9NWT6 349 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 NSG2Q9Y328 171 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 ZNF217O75362 1048 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 CFPP27918 469 aa10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-217ENST00000591595 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms