RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 J3QT63 122 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 CIDEAO60543 219 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF79Q15937 498 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 IGSF11Q5DX21 431 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 TSPO2Q5TGU0 170 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 PACRGQ96M98 296 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 PRO1933Q9H354 126 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 DTX4Q9Y2E6 619 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 TMEM210A6NLX4 147 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 CHST1O43916 411 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 MRPS11P82912 194 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 PITPNC1Q9UKF7 332 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 CACNA1GO43497 2377 aa11.62□□□□□ -0.55
SMARCA4-216ENST00000591545 IGSF23A1L1A6 192 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 CDIPTO14735 213 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 SOCS1O15524 211 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 COX6A1P12074 109 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 GZMHP20718 246 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 HOXA6P31267 233 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 GZMMP51124 257 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 ERVS71-1P61550 626 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 RASL11BQ9BPW5 248 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PPIAL4EA0A075B759 164 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 A0A087X0M5 115 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 A0A1B0GX30 115 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PPIAL4DF5H284 164 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 SEMA7AO75326 666 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PPIAL4FP0DN26 164 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 FGF8P55075 233 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 DLK1P80370 383 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 COTL1Q14019 142 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 DHRS11Q6UWP2 260 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PPIAL4AQ9Y536 164 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 M0R2Z0 102 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 BMPR1BO00238 502 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF253O75346 499 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 OR10J1P30954 320 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 RIGQ13278 110 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 TMEM91Q6ZNR0 172 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 SLC35E3Q7Z769 313 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 PERPQ96FX8 193 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 IGKV1-8A0A0C4DH67 115 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 LGALS7P47929 136 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 VWA1Q6PCB0 445 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 SLC16A13Q7RTY0 426 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 HOGA1Q86XE5 327 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 OR4A4PQ8NGN8 299 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 HSD17B10Q99714 261 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 GVINP1Q7Z2Y8 2422 aa11.61□□□□□ -0.55
SMARCA4-216ENST00000591545 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF260Q3ZCT1 412 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 Q6ZN92 141 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 LPAR2Q9HBW0 351 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 MEX3AA1L020 520 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 MS4A18H0YCH9 400 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 TSPAN2O60636 221 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 MS4A18Q3C1V0 323 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 MRPL24Q96A35 216 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 SFXN3Q9BWM7 321 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 KCNK15Q9H427 330 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 K7ESF4 209 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 MMP9P14780 707 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 ST6GALNAC2Q9UJ37 374 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 HAND1O96004 215 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 CDCP2Q5VXM1 449 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF343Q6P1L6 599 aa11.6□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 PITX3O75364 302 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 ARG1P05089 322 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 GAPTQ8N292 157 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 OR5A2Q8NGI9 324 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 GDF9O60383 454 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 PKIAP61925 76 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms