RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 DDB2Q92466 427 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 GPR82Q96P67 336 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 PHOX2BQ99453 314 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 P2RX4Q99571 388 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF716A6NP11 495 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CYB5R3P00387 301 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OR10J4P0C629 311 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 UBA52P62987 128 aaKnown RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 SLC9A3R2Q15599 337 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 TSC22D1Q15714 1073 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 ACP7Q6ZNF0 438 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OR13A1Q8NGR1 328 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 RFESDQ8TAC1 157 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 DERL3Q96Q80 235 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CABIN1Q9Y6J0 2220 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 IGHV3-64DA0A0J9YX35 117 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1B0GTL3 188 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CLEC18AA5D8T8 446 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 S100A9P06702 114 aaKnown RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 PIGPP57054 158 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 SLC35A2P78381 396 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 HLXQ14774 488 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 C2orf68Q2NKX9 166 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM128Q5BJH2 165 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CGB2Q6NT52 195 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CLEC18CQ8NCF0 446 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 RPUSD4Q96CM3 377 aaKnown RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 C18orf12Q96KH6 178 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 AUNIPQ9H7T9 357 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PRD5 423 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PRF3 423 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PRM7 423 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 IGHA1P01876 353 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 CTSDP07339 412 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR10K2Q6IF99 312 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM123Q8N131 208 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR5M8Q8NGP6 311 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 GTF3AQ92664 365 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 NKX6-2Q9C056 277 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TREM1Q9NP99 234 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR1A1Q9P1Q5 309 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 HILPDAQ9Y5L2 63 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TICRRQ7Z2Z1 1910 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 MTCL1Q9Y4B5 1905 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 ATP6V1G1O75348 118 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 DKK1O94907 266 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR2H2O95918 312 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 ANOS1P23352 680 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TNFSF8P32971 234 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SIGIRRQ6IA17 410 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TCTE3Q8IZS6 198 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 ARL6IP6Q8N6S5 226 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR13F1Q8NGS4 319 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 MMP28Q9H239 520 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 U3KQ87 197 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 IGHV3OR15-7A0A075B7D8 119 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 JTBO76095 146 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 LALBAP00709 142 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 VSIG10L2P0DP72 767 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 FAM71F2Q6NXP2 309 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF546Q86UE3 836 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 LYSMD2Q8IV50 215 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM86BQ8N661 226 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 WDR31Q8NA23 367 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 PRSS27Q9BQR3 290 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SLC25A33Q9BSK2 321 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 MRPL37Q9BZE1 423 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 OR51J1Q9H342 316 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SH2D2AQ9NP31 389 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 TNFRSF12AQ9NP84 129 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 ANXA10Q9UJ72 324 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 FBLL1A6NHQ2 334 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SNRPGP15A8MWD9 76 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 AKR1D1P51857 326 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 CNN1P51911 297 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 FAM3AP98173 230 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 DTX2Q86UW9 622 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 LSM10Q969L4 123 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 DUX5Q96PT3 197 aa5.36□□□□□ -1.55
SMAD4-212ENST00000591126 LSM2Q9Y333 95 aaKnown RBP5.36□□□□□ -1.55
SMAD4-212ENST00000591126 SIGLEC5O15389 551 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 S100A6P06703 90 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SLC6A1P30531 599 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF816Q0VGE8 651 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 DMKNQ6E0U4 476 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SPNS2Q8IVW8 549 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF645Q8N7E2 425 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 BBS1Q8NFJ9 593 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 OR10J6PQ8NGY7 276 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 FBLIM1Q8WUP2 373 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF426Q9BUY5 554 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SAV1Q9H4B6 383 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 NCOR1P1Q9H4R4 102 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM167BQ9NRX6 74 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms