RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 HIST1H2BAQ96A08 127 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 SNX22Q96L94 193 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 TTTY12Q9BZ98 90 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 FBLN5Q9UBX5 448 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 TINAGQ9UJW2 476 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 LDLRAD4O15165 306 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 MDP1Q86V88 176 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 LRRC29Q8WV35 223 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 FAM103A1Q9BTL3 118 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 PRSS50Q9UI38 385 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 ZNF818PQ6ZRF7 136 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 BIVMQ86UB2 503 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 SLC35E1Q96K37 410 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 PGLYRP1O75594 196 aaPredicted RBP14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 DTD1Q8TEA8 209 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 ZNF837Q96EG3 531 aaPredicted RBP14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 LYZL4Q96KX0 146 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 ATP23Q9Y6H3 246 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 ELOA3CA0A087WX78 387 aaPredicted RBP14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 BORCS7Q96B45 105 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 SMIM8Q96KF7 97 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.04
SMARCA4-215ENST00000590574 RPS23P62266 143 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 CFHR1Q03591 330 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 DEFB109BQ30KR1 87 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 MRGPRGQ86SM5 289 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 RNF122Q9H9V4 155 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 AUP1Q9Y679 476 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 F8VVB4 439 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 F8VWA3 439 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 CASP6P55212 293 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 TGIF1Q15583 401 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 C9orf152Q5JTZ5 239 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 NEIL1Q96FI4 390 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 CXXC4Q9H2H0 198 aa14.77□□□□□ -0.05
SMARCA4-215ENST00000590574 OOEPA6NGQ2 149 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 HSBP1L1C9JCN9 74 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 MMP9P14780 707 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 TIGITQ495A1 244 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FADS6Q8N9I5 356 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 Q9N2K0 584 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 H0YL77 283 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 TAS2R45P59539 299 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 ETV3LQ6ZN32 361 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 H1FOOQ8IZA3 346 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 GPR87Q9BY21 358 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A10PA6NDY2 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A18PA6NE21 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A16PA6NEW6 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A20PA6NIJ5 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A8PA6NJQ4 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A7PA6NKC0 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A22PA8MWA6 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A12PA8MX19 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A5PA8MXJ8 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A23PA8MXZ1 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 SYNGR3O43761 229 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A15PP0C7V4 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A13PP0C7W8 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A14PP0C7W9 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM90A24PP0C7X0 464 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 OR5D13Q8NGL4 314 aa14.76□□□□□ -0.05
SMARCA4-215ENST00000590574 TANC1Q9C0D5 1861 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 BCL2P10415 239 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 UCP3P55916 312 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 RND3P61587 244 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 FAM78BQ5VT40 261 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 ZNF383Q8NA42 475 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 MANBALQ9NQG1 85 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 ZNF331Q9NQX6 463 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 EFNA2O43921 213 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 RTN4RL2Q86UN3 420 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 SLC25A40Q8TBP6 338 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 COL4A4P53420 1690 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 DCAF10Q5QP82 559 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 GPR146Q96CH1 333 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 OR2J1Q9GZK6 312 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 FGF16O43320 207 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 ZIC3O60481 467 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 AGFG2O95081 481 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 FBP1P09467 338 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 OR10A7Q8NGE5 316 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 R3HDM4Q96D70 268 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 BOD1Q96IK1 185 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 PACRGQ96M98 296 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 GINS3Q9BRX5 216 aa14.75□□□□□ -0.05
SMARCA4-215ENST00000590574 OR5H1A6NKK0 313 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 GDF9O60383 454 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 RIPPLY2Q5TAB7 128 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 FBXW9Q5XUX1 488 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 TMPRSS7Q7RTY8 843 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 CLN8Q9UBY8 286 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 TUBD1Q9UJT1 453 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 IGLV3-12A0A075B6K2 115 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 TRGV10A0A0A0MS01 117 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 HSPB1P04792 205 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 NAT2P11245 290 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 CCL1P22362 96 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 ERVFC1-1P60608 527 aa14.74□□□□□ -0.05
SMARCA4-215ENST00000590574 PRDM14Q9GZV8 571 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms