RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SULT1C2O00338 296 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 FPR2P25090 351 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 NFYBP25208 207 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 MRPS10P82664 201 aaKnown RBP11.16□□□□□ -0.62
VMP1-210ENST00000589823 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 SPANXN2Q5MJ10 180 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 GPR157Q5UAW9 335 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 OR13D1Q8NGV5 346 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 MAFIPQ8WZ33 124 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 GCDHQ92947 438 aaPredicted RBP11.16□□□□□ -0.62
VMP1-210ENST00000589823 LHX4Q969G2 390 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 KIRREL1Q96J84 757 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 OCSTAMPQ9BR26 566 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 TMEM133Q9H2Q1 129 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 HIVEP1P15822 2718 aa11.16□□□□□ -0.62
VMP1-210ENST00000589823 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 ZANQ9Y493 2812 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 MEIS3P1A6NDR6 274 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 SDCBPO00560 298 aaPredicted RBP11.15□□□□□ -0.62
VMP1-210ENST00000589823 FABP7O15540 132 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 MMP23AO75900 390 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 AVPP01185 164 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 LPLP06858 475 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.62
VMP1-210ENST00000589823 FAM120AOSQ5T036 256 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 Q6ZPA2 131 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 Q6ZS49 121 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 Q71RC1 249 aaPredicted RBP11.15□□□□□ -0.62
VMP1-210ENST00000589823 CCDC190Q86UF4 302 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 HOGA1Q86XE5 327 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 OR4A4PQ8NGN8 299 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 NANPQ8TBE9 248 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 ABHD1Q96SE0 405 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.62
VMP1-210ENST00000589823 TRAV40A0A0B4J280 105 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 MEIOCA2RUB1 952 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 F2RL2O00254 374 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 CTDSPLO15194 276 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 SCTP09683 121 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 COX7A1P24310 79 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
VMP1-210ENST00000589823 SRP14P37108 136 aaKnown RBP11.14□□□□□ -0.63
VMP1-210ENST00000589823 GDNFP39905 211 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 DLX1P56177 255 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 ARPC4P59998 168 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 HTD2P86397 168 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 PRB3Q04118 309 aaPredicted RBP11.14□□□□□ -0.63
VMP1-210ENST00000589823 KLRD1Q13241 179 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 RNASE12Q5GAN4 147 aaKnown RBP11.14□□□□□ -0.63
VMP1-210ENST00000589823 STEAP3Q658P3 488 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 C1orf229Q6ZS94 237 aaPredicted RBP11.14□□□□□ -0.63
VMP1-210ENST00000589823 PNKDQ8N490 385 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 GVQW1Q8N7I0 195 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 BEST4Q8NFU0 473 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 OR52M1Q8NGK5 317 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 FCAMRQ8WWV6 532 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 GFOD1Q9NXC2 390 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 WNK2Q9Y3S1 2297 aa11.14□□□□□ -0.63
VMP1-210ENST00000589823 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 IGHV3-43A0A0B4J1X8 118 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 RNASEK-C17orf49H0YIS7 233 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 GABARAPH6UMI1 98 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 HSPA12AO43301 675 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 RBBP9O75884 186 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 RGS11O94810 467 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 GSTT2P0CG29 244 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 GSTT2BP0CG30 244 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 IGHV3-43DP0DP04 118 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 RCVRNP35243 200 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 ETV6P41212 452 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 UBE2E1P51965 193 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 KIAA2026Q5HYC2 2103 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 LINC00299Q6ZSB3 139 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 C5orf24Q7Z6I8 188 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 PDZD9Q8IXQ8 264 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 ABHD12Q8N2K0 398 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 OR52I2Q8NH67 350 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 SOSTQ9BQB4 213 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 CLEC7AQ9BXN2 247 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 OR2S2Q9NQN1 319 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 SLC23A1Q9UHI7 598 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
VMP1-210ENST00000589823 F8P00451 2351 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 ANK3Q12955 4377 aaKnown RBP11.12□□□□□ -0.63
VMP1-210ENST00000589823 A0A087X0M5 115 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 IGHV2-26A0A0B4J1V2 119 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 A0A1B0GX30 115 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms