RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SRRM5B3KS81 715 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 IFNL4K9M1U5 179 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 GPR31O00270 319 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 PHF1O43189 567 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 MPC2O95563 127 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 IFNA21P01568 189 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 IGHV1-46P01743 117 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 OR5AC1P0C628 307 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 IGKV1-13P0DP09 117 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 RPA2P15927 270 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 TNFSF4P23510 183 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 LMO1P25800 156 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 S100A11P31949 105 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 CD80P33681 288 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 OR3A1P47881 315 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 AP2S1P53680 142 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 CYCSP99999 105 aaKnown RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 TMEM187Q14656 261 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 HMGN3Q15651 99 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 SP6Q3SY56 376 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 SLC35E4Q6ICL7 350 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 C11orf87Q6NUJ2 197 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 ADAM5Q6NVV9 412 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF546Q86UE3 836 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 H1FOOQ8IZA3 346 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 SLC7A5P1Q8MH63 180 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 FAM185AQ8N0U4 392 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 GAPTQ8N292 157 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 PRR18Q8N4B5 295 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 UBALD1Q8TB05 177 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 OR10C1Q96KK4 312 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 C2orf50Q96LR7 162 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 PSMG3-AS1Q96PY0 264 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 SUCNR1Q9BXA5 334 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 MFFQ9GZY8 342 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 ARL6Q9H0F7 186 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 HEXA-AS1Q9H8Q6 139 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 NGBQ9NPG2 151 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 OR1A1Q9P1Q5 309 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 MBD2Q9UBB5 411 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 KIF25Q9UIL4 384 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 FBXO9Q9UK97 447 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 DIDO1Q9BTC0 2240 aaKnown RBP7.36□□□□□ -1.23
SMAD4-206ENST00000588860 YLPM1P49750 1951 aaKnown RBP7.35□□□□□ -1.23
SMAD4-206ENST00000588860 ARFGEF3Q5TH69 2177 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 NKX2-6A6NCS4 301 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 NPIPB11E5RHQ5 1161 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 MPPED1O15442 326 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 HSPA12AO43301 675 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 RP2O75695 350 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 OR4A8P0C604 315 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 SFTPCP11686 197 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 PSMB6P28072 239 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 CHRNB4P30926 498 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 GNRHRP30968 328 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 PRDX2P32119 198 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 HTR2BP41595 481 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 GABRA2P47869 451 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 KCNJ3P48549 501 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 RND3P61587 244 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 RELBQ01201 579 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 AESQ08117 197 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 ADIPOQQ15848 244 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 KRBOX4Q5JUW0 171 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 TMEM65Q6PI78 240 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 TEX261Q6UWH6 196 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF818PQ6ZRF7 136 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 TBC1D26Q86UD7 250 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 FAM90A1Q86YD7 464 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 LGI3Q8N145 548 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 CD177Q8N6Q3 437 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 DCUN1D4Q92564 292 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 RNASE6Q93091 150 aaKnown RBP7.35□□□□□ -1.23
SMAD4-206ENST00000588860 GALNT14Q96FL9 552 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 COQ2Q96H96 371 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 VRK1Q99986 396 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-206ENST00000588860 DNTTIP1Q9H147 329 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 TAF9BQ9HBM6 251 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 CCL28Q9NRJ3 127 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
SMAD4-206ENST00000588860 GSKIPQ9P0R6 139 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 ITGB1BP2Q9UKP3 347 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 ZDHHC8Q9ULC8 765 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 TNFSF18Q9UNG2 199 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 U3KQ87 197 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 POLQO75417 2590 aa7.35□□□□□ -1.23
SMAD4-206ENST00000588860 IGKV1D-17A0A075B6S4 117 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 A0A0D9SG52 128 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 C3orf85A0A1B0GTC6 90 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 OOEPA6NGQ2 149 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 VSTM5A8MXK1 200 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-206ENST00000588860 IFNA7P01567 189 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 PSG2P11465 335 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 S100GP29377 79 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 CFHR2P36980 270 aa7.34□□□□□ -1.23
SMAD4-206ENST00000588860 GATA4P43694 442 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms