RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ECI1P42126 302 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 GPR6P46095 362 aaPredicted RBP18.47■□□□□ 0.55
ATG4D-209ENST00000588857 AADACL3Q5VUY0 350 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 TMED4Q7Z7H5 227 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 SPICQ8N5J4 248 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 UBALD1Q8TB05 177 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 ARL11Q969Q4 196 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 MIOXQ9UGB7 285 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 OPN4Q9UHM6 478 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 TRBV6-7A0A0A0MS04 114 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 MEX3AA1L020 520 aaKnown RBP18.46■□□□□ 0.55
ATG4D-209ENST00000588857 HSPA12AO43301 675 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 IGHV4-39P01824 125 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 HBZP02008 142 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 SSTR5P35346 364 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 HERV-K104P61576 105 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 CR1LQ2VPA4 569 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 NLRC3Q7RTR2 1065 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 FGFRL1Q8N441 504 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 OR1L1Q8NH94 360 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 BEX2Q9BXY8 128 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 LIME1Q9H400 295 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 BEX1Q9HBH7 125 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 SLC23A1Q9UHI7 598 aa18.46■□□□□ 0.55
ATG4D-209ENST00000588857 SPG11Q96JI7 2443 aa18.46■□□□□ 0.54
ATG4D-209ENST00000588857 hADV38S2A0JD32 116 aa18.45■□□□□ 0.54
ATG4D-209ENST00000588857 FAM172BPA6NC97 362 aa18.45■□□□□ 0.54
ATG4D-209ENST00000588857 PGAM2P15259 253 aa18.45■□□□□ 0.54
ATG4D-209ENST00000588857 ANXA7P20073 488 aaKnown RBP18.45■□□□□ 0.54
ATG4D-209ENST00000588857 MEF2CQ06413 473 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-209ENST00000588857 SURF2Q15527 256 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-209ENST00000588857 H1FXQ92522 213 aaKnown RBP18.45■□□□□ 0.54
ATG4D-209ENST00000588857 RAB9BQ9NP90 201 aa18.45■□□□□ 0.54
ATG4D-209ENST00000588857 VSIG4Q9Y279 399 aa18.45■□□□□ 0.54
ATG4D-209ENST00000588857 YLPM1P49750 1951 aaKnown RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 A0A0B4J293 547 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 NPIPB11E5RHQ5 1161 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 PRAF2O60831 178 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 PPYP01298 95 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 AADACP22760 399 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 ZBTB25P24278 435 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 FPR2P25090 351 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 MECP2P51608 486 aaKnown RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 FXYD4P59646 89 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 RPL31P62899 125 aaKnown RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 ZNF525Q8N782 197 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 OR8B3Q8NGG8 313 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 DACT3Q96B18 629 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 NEIL1Q96FI4 390 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 OR8B2Q96RD0 313 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 BARX1Q9HBU1 254 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-209ENST00000588857 LPAR3Q9UBY5 353 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 ZNF69Q9UC07 566 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 ALG5Q9Y673 324 aa18.44■□□□□ 0.54
ATG4D-209ENST00000588857 ARID1AO14497 2285 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 H1FOOQ8IZA3 346 aaPredicted RBP18.43■□□□□ 0.54
ATG4D-209ENST00000588857 RFESDQ8TAC1 157 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 TOMM40LQ969M1 308 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 MOB3AQ96BX8 217 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 OR1A1Q9P1Q5 309 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 POLQO75417 2590 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 PDZD2O15018 2839 aa18.43■□□□□ 0.54
ATG4D-209ENST00000588857 C15orf65H3BRN8 121 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 FCN3O75636 299 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 ZNF728P0DKX0 622 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 PDLIM4P50479 330 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 BCAP31P51572 246 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 ATP5J2P56134 94 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 BAMBIQ13145 260 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 CADM3Q8N126 398 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 NRGNQ92686 78 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 CORO2AQ92828 525 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 NINJ1Q92982 152 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 CALYQ9NYX4 217 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 GPR132Q9UNW8 380 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 UBE2J1Q9Y385 318 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-209ENST00000588857 LINC00312Q9Y6C7 94 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 TUSC2O75896 110 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 HEXAP06865 529 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 WNT2P09544 360 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 CEACAM6P40199 344 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 METTL11BQ5VVY1 283 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 ZFAND1Q8TCF1 268 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 ALX4Q9H161 411 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-209ENST00000588857 GPN1Q9HCN4 374 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-209ENST00000588857 OR2S2Q9NQN1 319 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 C19orf12Q9NSK7 152 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 C14orf166Q9Y224 244 aaKnown RBP18.42■□□□□ 0.54
ATG4D-209ENST00000588857 OR2W1Q9Y3N9 320 aa18.42■□□□□ 0.54
ATG4D-209ENST00000588857 A0A0A6YYJ9 748 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 KBTBD11-OT1A0A1B0GTJ5 212 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 ZNF729A6NN14 1252 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-209ENST00000588857 GPR37O15354 613 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 TAS2R31P59538 309 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 HTD2P86397 168 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 C4orf46Q504U0 113 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 GLDNQ6ZMI3 551 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-209ENST00000588857 FXYD6Q9H0Q3 95 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 NARFLQ9H6Q4 476 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 RDH8Q9NYR8 311 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms