RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 EXOSC1Q9Y3B2 195 aaKnown RBP12.38□□□□□ -0.43
VAT1-205ENST00000587173 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 MCRIP1C9JLW8 97 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 AIPO00170 330 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 AP4M1O00189 453 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 MT-ND4P03905 459 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 VSIG8P0DPA2 414 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 AQP4P55087 323 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 ADARB1P78563 741 aaKnown RBP12.37□□□□□ -0.43
VAT1-205ENST00000587173 DCTN2Q13561 401 aaKnown RBP12.37□□□□□ -0.43
VAT1-205ENST00000587173 YIF1BQ5BJH7 314 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 TEX38Q6PEX7 206 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 IZUMO2Q6UXV1 221 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 TGIF2LXQ8IUE1 241 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 ZNF695Q8IW36 515 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 MRPS24Q96EL2 167 aaKnown RBP12.37□□□□□ -0.43
VAT1-205ENST00000587173 TMEM80Q96HE8 168 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 DUX3Q96PT4 197 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
VAT1-205ENST00000587173 DIMT1Q9UNQ2 313 aaKnown RBP12.37□□□□□ -0.43
VAT1-205ENST00000587173 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 C15orf65H3BRN8 121 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 SPINT2O43291 252 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 GPX5O75715 221 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 CD1BP29016 333 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 GP2P55259 537 aaKnown RBP12.36□□□□□ -0.43
VAT1-205ENST00000587173 RAB25P57735 213 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 PNLIPRP3Q17RR3 467 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 Q3ZCU0 254 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 Q499Y3 187 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 ZNF497Q6ZNH5 498 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 IZUMO1Q8IYV9 350 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 TFAP2CQ92754 450 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 WWC2-AS2Q96NR7 200 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 ABCG5Q9H222 651 aa12.36□□□□□ -0.43
VAT1-205ENST00000587173 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
VAT1-205ENST00000587173 SIRT4Q9Y6E7 314 aaPredicted RBP12.36□□□□□ -0.43
VAT1-205ENST00000587173 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 TXNL1O43396 289 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 MOSP00540 346 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 IGFBP3P17936 291 aaPredicted RBP12.35□□□□□ -0.43
VAT1-205ENST00000587173 GPR12P47775 334 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 DGCR2P98153 550 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 TMEM30BQ3MIR4 351 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 C6orf183Q5T699 404 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
VAT1-205ENST00000587173 JAGN1Q8N5M9 183 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 OR8H1Q8NGG4 311 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 UBALD1Q8TB05 177 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 RTN4IP1Q8WWV3 396 aaPredicted RBP12.35□□□□□ -0.43
VAT1-205ENST00000587173 ORAI1Q96D31 301 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 Q9H521 79 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 ETAA1Q9NY74 926 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 GNG12Q9UBI6 72 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 CLEC2DQ9UHP7 191 aa12.35□□□□□ -0.43
VAT1-205ENST00000587173 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
VAT1-205ENST00000587173 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 A0A1W2PP11 408 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 CCL24O00175 119 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
VAT1-205ENST00000587173 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
VAT1-205ENST00000587173 RAB12Q6IQ22 244 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 TRAT1Q6PIZ9 186 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 Q8N6K4 173 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 Q8N9W7 124 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 MUL1Q969V5 352 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 ST6GALNAC6Q969X2 333 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 PEX16Q9Y5Y5 336 aa12.34□□□□□ -0.43
VAT1-205ENST00000587173 A0A1W2PPK0 400 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 C12orf77C9JDV5 145 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 CA11O75493 328 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 LALBAP00709 142 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
VAT1-205ENST00000587173 TAS2R43P59537 309 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 GPR50Q13585 617 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 AWAT2Q6E213 333 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 PRR18Q8N4B5 295 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 S1PR3Q99500 378 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.44
VAT1-205ENST00000587173 RAB26Q9ULW5 256 aa12.33□□□□□ -0.44
VAT1-205ENST00000587173 TRAV8-7A0A075B6U6 113 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 MAS1P04201 325 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 GLAP06280 429 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 ELANEP08246 267 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 GNAO1P09471 354 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 FSTP19883 344 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 VDAC1P21796 283 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms