RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MYF5P13349 255 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 CD40P25942 277 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 CLDN18P56856 261 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 RBM11P57052 281 aaKnown RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 OR1L8Q8NGR8 309 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 SNRNP40Q96DI7 357 aaKnown RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 RASL10BQ96S79 203 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 BCORQ6W2J9 1755 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 H0Y980 276 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 SYNGR1O43759 233 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 C16orf47Q6ZP98 133 aaPredicted RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 MEX3AA1L020 520 aaKnown RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 FABP2P12104 132 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 ZP4Q12836 540 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 GABRA6Q16445 453 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 Q8WTZ3 238 aa11.4□□□□□ -0.58
RNF43-208ENST00000584437 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
RNF43-208ENST00000584437 A0A0U1RQV5 110 aa11.4□□□□□ -0.59
RNF43-208ENST00000584437 LHX8Q68G74 356 aa11.4□□□□□ -0.59
RNF43-208ENST00000584437 GUSBP11Q6P575 273 aa11.4□□□□□ -0.59
RNF43-208ENST00000584437 A0A1W2PPV9 198 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 CDIPTO14735 213 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
RNF43-208ENST00000584437 LYZL6O75951 148 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 LIMS1P48059 325 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 RUNX1Q01196 453 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 CLEC5AQ9NY25 188 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 HKR1P10072 659 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 PTPMT1Q8WUK0 201 aaPredicted RBP11.39□□□□□ -0.59
RNF43-208ENST00000584437 DSPPQ9NZW4 1301 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 FAM181AQ8N9Y4 354 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 PRSS27Q9BQR3 290 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 CLEC1BQ9P126 229 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 H3BVH4 76 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 GFRALQ6UXV0 394 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 CCL17Q92583 94 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 DDA1Q9BW61 102 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
RNF43-208ENST00000584437 GPR35Q9HC97 309 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 AURKAIP1Q9NWT8 199 aaPredicted RBP11.39□□□□□ -0.59
RNF43-208ENST00000584437 METTL1Q9UBP6 276 aaKnown RBP11.39□□□□□ -0.59
RNF43-208ENST00000584437 KLHDC2Q9Y2U9 406 aa11.39□□□□□ -0.59
RNF43-208ENST00000584437 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 ZNF205O95201 554 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 MDKP21741 143 aaPredicted RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 PRSS12P56730 875 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 PLP1P60201 277 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 KCNE5Q9UJ90 142 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 C2CD4DB7Z1M9 353 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 COX7A1P24310 79 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 LGALS7P47929 136 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 Q6ZS52 159 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 RSG1Q9BU20 258 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 HPRT1P00492 218 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 HINT1P49773 126 aaPredicted RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 P2RY4P51582 365 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 ROM1Q03395 351 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 OR11H4Q8NGC9 324 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 SLC25A38Q96DW6 304 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 CLN8Q9UBY8 286 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 SCN7AQ01118 1682 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 SHISA7A6NL88 538 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 NDUFB4O95168 129 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 IGHV3-13P01766 116 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 IGHV3-7P01780 117 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 ASAH2BP0C7U1 165 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 HARBI1Q96MB7 349 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 GPR61Q9BZJ8 451 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
RNF43-208ENST00000584437 CISD1Q9NZ45 108 aaKnown RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
RNF43-208ENST00000584437 ARAP2Q8WZ64 1704 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 J3QR06 171 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 DNASE2O00115 360 aaPredicted RBP11.37□□□□□ -0.59
RNF43-208ENST00000584437 NXPH1P58417 271 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 TGIF2LYQ8IUE0 185 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 OR8I2Q8N0Y5 310 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 C1RLQ9NZP8 487 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 A0A0B4J293 547 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 KCNAB3O43448 404 aa11.37□□□□□ -0.59
RNF43-208ENST00000584437 DXOO77932 396 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms