RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	OR8H3	Q8N146	312 aa		10.84	□□□□□ -0.67
CDK5RAP3-233	ENST00000584186	NRG4	Q8WWG1	115 aa		10.84	□□□□□ -0.67
CDK5RAP3-233	ENST00000584186	SGCD	Q92629	289 aa		10.84	□□□□□ -0.67
CDK5RAP3-233	ENST00000584186	GFOD1	Q9NXC2	390 aa		10.84	□□□□□ -0.67
CDK5RAP3-233	ENST00000584186	RCC2	Q9P258	522 aa	Known RBP	10.84	□□□□□ -0.67
CDK5RAP3-233	ENST00000584186	PRKDC	P78527	4128 aa	Known RBP	10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C12orf77	C9JDV5	145 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SPINT2	O43291	252 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	MPIG6B	O95866	241 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PRB2	P02812	416 aa	Predicted RBP	10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GAPDH	P04406	335 aa	Known RBP	10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FUT3	P21217	361 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LOXL3	P58215	753 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CD83	Q01151	205 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SPHAR	Q15513	63 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	BEAN1	Q3B7T3	259 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OXLD1	Q5BKU9	147 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TCTEX1D4	Q5JR98	221 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	NKAPL	Q5M9Q1	402 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RBM48	Q5RL73	367 aa	Known RBP	10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SAMD5	Q5TGI4	173 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CEACAM19	Q7Z692	300 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	MS4A15	Q8N5U1	240 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR4X2	Q8NGF9	303 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR10V1	Q8NGI7	309 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR52M1	Q8NGK5	317 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR1L1	Q8NH94	360 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CYYR1	Q96J86	154 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	UQCC2	Q9BRT2	126 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GNG12	Q9UBI6	72 aa		10.83	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	IGHV1-3	A0A0C4DH29	117 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	NCBP2L	A6PVI3	153 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186		H0YHG0	523 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SLC31A2	O15432	143 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RCC1	P18754	421 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	IL3RA	P26951	378 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C6orf183	Q5T699	404 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ZNF329	Q86UD4	541 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LYPD6	Q86Y78	171 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C5orf56	Q8N8D9	126 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TMEM203	Q969S6	136 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186		Q96M66	194 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CST11	Q9H112	138 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RAB9B	Q9NP90	201 aa		10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PSMB11	A5LHX3	300 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FAM90A10P	A6NDY2	464 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FAM90A7P	A6NKC0	464 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FAM90A23P	A8MXZ1	464 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PDCD6	O75340	191 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	HBZ	P02008	142 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	HSMCR30	P0CW71	290 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CD33	P20138	364 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GP2	P55259	537 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	HSD17B12	Q53GQ0	312 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LIPK	Q5VXJ0	399 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RNLS	Q5VYX0	342 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GLT8D1	Q68CQ7	371 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SIGIRR	Q6IA17	410 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR10K2	Q6IF99	312 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	UNQ9370/PRO34162	Q6UXP9	181 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LRRTM1	Q86UE6	522 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LINC00311	Q8N616	119 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	UFD1	Q92890	307 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	NOL4L	Q96MY1	436 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CCDC90B	Q9GZT6	254 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TAF9B	Q9HBM6	251 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	KCNIP1	Q9NZI2	227 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GHRL	Q9UBU3	117 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LINC00527	Q9UJ94	153 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LSM2	Q9Y333	95 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TPRKB	Q9Y3C4	175 aa		10.81	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SERPINE3	A8MV23	424 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PLXNB1	O43157	2135 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CA11	O75493	328 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PF4	P02776	101 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	UBB	P0CG47	229 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SRM	P19623	302 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ZNF134	P52741	427 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CT45A1	Q5HYN5	189 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TRAT1	Q6PIZ9	186 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C5orf24	Q7Z6I8	188 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C8orf31	Q8N9H6	132 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR2T10	Q8NGZ9	312 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CT45A3	Q8NHU0	189 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	PHYHIP	Q92561	330 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RBMXL1	Q96E39	390 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	EAF1	Q96JC9	268 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	NEDD4L	Q96PU5	975 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	KCNK15	Q9H427	330 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR2S2	Q9NQN1	319 aa		10.8	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ZNF736	B4DX44	427 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FGF16	O43320	207 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RGS10	O43665	173 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SC5D	O75845	299 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GLA	P06280	429 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	VSIG8	P0DPA2	414 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SLC35A2	P78381	396 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms