RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 LEMD1Q68G75 181 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 Q6ZVH6 145 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 YRDCQ86U90 279 aaKnown RBP9.06□□□□□ -0.96
TOP3A-214ENST00000582981 TMEM256Q8N2U0 113 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 NAT6Q93015 286 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 HLA-CQ95604 372 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
TOP3A-214ENST00000582981 ULBP2Q9BZM5 246 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 IL36RNQ9UBH0 155 aa9.06□□□□□ -0.96
TOP3A-214ENST00000582981 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 H7BYZ3 331 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 CCKARP32238 428 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 NTF4P34130 210 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 GALR1P47211 349 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 SYT13Q7L8C5 426 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 TMEM171Q8WVE6 324 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 OCIAD1Q9NX40 245 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 IGKV1-12A0A0C4DH73 117 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 RRP8O43159 456 aaKnown RBP9.05□□□□□ -0.96
TOP3A-214ENST00000582981 DHRS3O75911 302 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 IGKV1D-12P01611 117 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 MSR1P21757 451 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 ABLIM2Q6H8Q1 611 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 FGFBP3Q8TAT2 258 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 PIGCQ92535 297 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 OXGR1Q96P68 337 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 SMIM7Q9BQ49 75 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 ZFP30Q9Y2G7 519 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 LAMA5O15230 3695 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 IGSF23A1L1A6 192 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 IL6RP08887 468 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-214ENST00000582981 NPBWR2P48146 333 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 ZNF92Q03936 586 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-214ENST00000582981 MMDQ15546 238 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 Q6ZPA2 131 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 C17orf82Q86X59 251 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-214ENST00000582981 GBGT1Q8N5D6 347 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
TOP3A-214ENST00000582981 ZNF442Q9H7R0 627 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 SDF2L1Q9HCN8 221 aa9.05□□□□□ -0.96
TOP3A-214ENST00000582981 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 A0A0G2JMM0 328 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 A0A1W2PPB8 328 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 A0A1W2PR80 420 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 A0A1W2PRS3 328 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 CRYM-AS1A6NIL9 109 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 KIR3DP1A8MWS1 328 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 CCL25O15444 150 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 RHBDD2Q6NTF9 364 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 NUFIP2Q7Z417 695 aaKnown RBP9.04□□□□□ -0.96
TOP3A-214ENST00000582981 VN1R17PQ8TDU5 208 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 SPACA9Q96E40 222 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-214ENST00000582981 BOD1Q96IK1 185 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-214ENST00000582981 GAL3ST2Q9H3Q3 398 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 MSL2Q9HCI7 577 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 LOC102724200A0A096LPH7 203 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-214ENST00000582981 A0A1W2PNV4 684 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 NKX2-6A6NCS4 301 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 ZFAND5O76080 213 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 GLB1P16278 677 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 DYNLT3P51808 116 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 HIST1H3AP68431 136 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 VASH2Q86V25 355 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 ACY3Q96HD9 319 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
TOP3A-214ENST00000582981 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
TOP3A-214ENST00000582981 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 DHHO43323 396 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 HBE1P02100 147 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 AADACP22760 399 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 CCL7P80098 99 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 FAM89BQ8N5H3 189 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 GJC3Q8NFK1 279 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 BORCS8Q96FH0 119 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 SRXN1Q9BYN0 137 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 ST3GAL6Q9Y274 331 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 LNP1A1A4G5 178 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 NUPR1O60356 82 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 IGHEP01854 428 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 CNN1P51911 297 aaKnown RBP9.03□□□□□ -0.96
TOP3A-214ENST00000582981 FAM3BP58499 235 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-214ENST00000582981 ZFP36L1Q07352 338 aaKnown RBP9.03□□□□□ -0.96
TOP3A-214ENST00000582981 TESK1Q15569 626 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-214ENST00000582981 Q96M66 194 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
TOP3A-214ENST00000582981 MOB1AQ9H8S9 216 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms