RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 MTCH1Q9NZJ7 389 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 ELF5Q9UKW6 265 aaPredicted RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 FZR1Q9UM11 496 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 A6NLC8 198 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 CDIPTO14735 213 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 SH2D1BO14796 132 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 DEGS1O15121 323 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 SYNGR1O43759 233 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 CREBL2O60519 120 aaPredicted RBP8.54□□□□□ -1.04
SS18-221ENST00000582448 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 PMP2P02689 132 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 ACAA1P09110 424 aaPredicted RBP8.54□□□□□ -1.04
SS18-221ENST00000582448 EGR1P18146 543 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 IL2RGP31785 369 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 HRH1P35367 487 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 SERPINF1P36955 418 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 NPBWR2P48146 333 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
SS18-221ENST00000582448 FAM76BQ5HYJ3 339 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 SPIN3Q5JUX0 258 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 OR2Z1Q8NG97 314 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 OR4S1Q8NGB4 309 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 MED30Q96HR3 178 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 FGF23Q9GZV9 251 aaPredicted RBP8.54□□□□□ -1.04
SS18-221ENST00000582448 PPA2Q9H2U2 334 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 OR51J1Q9H342 316 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 MS4A5Q9H3V2 200 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 ZNF286AQ9HBT8 521 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 AK3Q9UIJ7 227 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
SS18-221ENST00000582448 HEATR1Q9H583 2144 aaKnown RBP8.54□□□□□ -1.04
SS18-221ENST00000582448 hCG_1807616A0A1W2PRN6 198 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 C7orf66A4D0T2 115 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 F5H5P2 479 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 IL5P05113 134 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZNF44P15621 663 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZNF154Q13106 437 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 FOXE3Q13461 319 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 GRK1Q15835 563 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 C4orf46Q504U0 113 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 OR52W1Q6IF63 320 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 BATF2Q8N1L9 274 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZCCHC24Q8N2G6 241 aaKnown RBP8.53□□□□□ -1.04
SS18-221ENST00000582448 POC1AQ8NBT0 407 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 OR5AP2Q8NGF4 316 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 SULT4A1Q9BR01 284 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 NECAP2Q9NVZ3 263 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZNF69Q9UC07 566 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
SS18-221ENST00000582448 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 KIR2DS1A0A191URI9 304 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 H0YL77 283 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MLNRO43193 412 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 NOS1APO75052 506 aaPredicted RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 FCGR3AP08637 254 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 OR4A8P0C604 315 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 PGA5P0DJD9 388 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 DAOP14920 347 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MDH2P40926 338 aaKnown RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 GLP1RP43220 463 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 KIR2DS4P43632 304 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 EIF2B2P49770 351 aaKnown RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 ZNF81P51508 661 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 TAS2R31P59538 309 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 KIR2DS1Q14954 304 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 CDK10Q15131 360 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MICBQ29980 383 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 SMIM21Q3B7S5 101 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 SIGIRRQ6IA17 410 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 C11orf88Q6PI97 169 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 TMED4Q7Z7H5 227 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 ZDHHC22Q8N966 263 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 OR6F1Q8NGZ6 308 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 SGMS2Q8NHU3 365 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 IL17DQ8TAD2 202 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 ELMOD3Q96FG2 381 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 ZNF488Q96MN9 340 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 SLC6A7Q99884 636 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 NRIP2Q9BQI9 281 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 ALX4Q9H161 411 aaPredicted RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 GHITMQ9H3K2 345 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms