RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 SSTR2P30874 369 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 AESQ08117 197 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 FGL1Q08830 312 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
MKS1-211ENST00000581761 FAM185AQ8N0U4 392 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 PPP1R35Q8TAP8 253 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 Q8TCH9 128 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 CA5BP1Q8WTZ4 195 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 IL1F10Q8WWZ1 152 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 COQ2Q96H96 371 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 SUCNR1Q9BXA5 334 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
MKS1-211ENST00000581761 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 OR1A1Q9P1Q5 309 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 CHD3Q12873 2000 aaKnown RBP12.25□□□□□ -0.45
MKS1-211ENST00000581761 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
MKS1-211ENST00000581761 C17orf100A8MU93 164 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 M0R233 179 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 HSD17B6O14756 317 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 ARPC5O15511 151 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
MKS1-211ENST00000581761 CD55P08174 381 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 ADH4P08319 380 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 IRF2P14316 349 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 CXCL2P19875 107 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 C4BPBP20851 252 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 COL8A1P27658 744 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 GRNP28799 593 aaKnown RBP12.25□□□□□ -0.45
MKS1-211ENST00000581761 RND3P61587 244 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 CYCSP99999 105 aaKnown RBP12.25□□□□□ -0.45
MKS1-211ENST00000581761 TMEM187Q14656 261 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 TESK1Q15569 626 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 GALNT14Q96FL9 552 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 SNX22Q96L94 193 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 NMES1Q9C002 83 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 CCL28Q9NRJ3 127 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 RDH8Q9NYR8 311 aa12.25□□□□□ -0.45
MKS1-211ENST00000581761 OOEPA6NGQ2 149 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 MPPED1O15442 326 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
MKS1-211ENST00000581761 HSPA12AO43301 675 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 ZNF737O75373 536 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 SLC25A4P12235 298 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 GNRHRP30968 328 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 SP6Q3SY56 376 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 LRRC37A5PQ49AS3 106 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 BEX5Q5H9J7 111 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 ZNF818PQ6ZRF7 136 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 OR10V1Q8NGI7 309 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 OR1L1Q8NH94 360 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 PPP1R1CQ8WVI7 109 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 SHARPINQ9H0F6 387 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 DYNLRB1Q9NP97 96 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
MKS1-211ENST00000581761 OR2W1Q9Y3N9 320 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
MKS1-211ENST00000581761 C12orf77C9JDV5 145 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 IFNA21P01568 189 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 IL2RGP31785 369 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 GLIPR1P48060 266 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 LUMP51884 338 aaPredicted RBP12.23□□□□□ -0.45
MKS1-211ENST00000581761 EDDM3AQ14507 147 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 OPCMLQ14982 345 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 C11orf87Q6NUJ2 197 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 LIAT1Q6ZQX7 453 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 LGI3Q8N145 548 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 ZNF808Q8N4W9 903 aaPredicted RBP12.23□□□□□ -0.45
MKS1-211ENST00000581761 TPRX1Q8N7U7 411 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 LILRB1Q8NHL6 650 aaPredicted RBP12.23□□□□□ -0.45
MKS1-211ENST00000581761 ANGPTL6Q8NI99 470 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 THAP6Q8TBB0 222 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
MKS1-211ENST00000581761 EGLN1Q9GZT9 426 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 PPP1R3CQ9UQK1 317 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 TACC2O95359 2948 aa12.23□□□□□ -0.45
MKS1-211ENST00000581761 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 TUBAL3A6NHL2 446 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 LRRC30A6NM36 301 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 MGST3O14880 152 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 PLAUP00749 431 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 HBZP02008 142 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 S100GP29377 79 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 APOBEC3AP31941 199 aaPredicted RBP12.22□□□□□ -0.45
MKS1-211ENST00000581761 CEACAM6P40199 344 aa12.22□□□□□ -0.45
MKS1-211ENST00000581761 CCL8P80075 99 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms