RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 DAPP51397 102 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 ZNF137PP52743 207 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 PIGYQ3MUY2 71 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 Q3ZCU0 254 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 ZNF691Q5VV52 312 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 SUMF2Q8NBJ7 301 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 PXT1Q8NFP0 134 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 CASTOR1Q8WTX7 329 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 ASB9Q96DX5 294 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 TMED9Q9BVK6 235 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 DPCDQ9BVM2 203 aaPredicted RBP9.77□□□□□ -0.85
SS18-219ENST00000581570 RETNQ9HD89 108 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 KIAA1456Q9P272 454 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 ERGIC3Q9Y282 383 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 ARPC1BO15143 372 aaKnown RBP9.76□□□□□ -0.85
SS18-219ENST00000581570 SOX15O60248 233 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 IGHV3-11P01762 117 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 CNTFRP26992 372 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 NANOS3P60323 173 aaKnown RBP9.76□□□□□ -0.85
SS18-219ENST00000581570 ACTBP60709 375 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 ZNF85Q03923 595 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 LSAMPQ13449 338 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 ECSCRQ19T08 205 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 C12orf73Q69YU5 71 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 FAHD1Q6P587 224 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 CCDC107Q8WV48 283 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 LINC00476Q8WZB0 136 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 CCDC124Q96CT7 223 aaKnown RBP9.76□□□□□ -0.85
SS18-219ENST00000581570 NRBF2Q96F24 287 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 ZNF251Q9BRH9 671 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 ANKRD60Q9BZ19 345 aa9.76□□□□□ -0.85
SS18-219ENST00000581570 AQP12BA6NM10 295 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 ZAR1LA6NP61 321 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 ORC5O43913 435 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 CSTBP04080 98 aaKnown RBP9.75□□□□□ -0.85
SS18-219ENST00000581570 HOXB6P17509 224 aaKnown RBP9.75□□□□□ -0.85
SS18-219ENST00000581570 EPHA2P29317 976 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 ZNF134P52741 427 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 CT45A1Q5HYN5 189 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 FDX2Q6P4F2 183 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 AQP12AQ8IXF9 295 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 ZNF439Q8NDP4 499 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 OR5D14Q8NGL3 314 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 OR10K1Q8NGX5 313 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 CT45A3Q8NHU0 189 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 DDB2Q92466 427 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 RITA1Q96K30 269 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 CST11Q9H112 138 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 HIPK2Q9H2X6 1198 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 ZNF581Q9P0T4 197 aa9.75□□□□□ -0.85
SS18-219ENST00000581570 FOXA2Q9Y261 457 aaPredicted RBP9.75□□□□□ -0.85
SS18-219ENST00000581570 H0Y980 276 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 NBR2O15453 112 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 SULT1B1O43704 296 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 LANCL1O43813 399 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 MITFO75030 526 aaPredicted RBP9.74□□□□□ -0.85
SS18-219ENST00000581570 OR7C1O76099 320 aaPredicted RBP9.74□□□□□ -0.85
SS18-219ENST00000581570 HTR3BO95264 441 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 LY6G6CO95867 125 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 HTR1AP08908 422 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 CCR9P51686 369 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 RAB40BQ12829 278 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 RSU1Q15404 277 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 HSP90B2PQ58FF3 399 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 LPCAT4Q643R3 524 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 KCTD20Q7Z5Y7 419 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 GTSCR1Q86UQ5 136 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 SATL1Q86VE3 508 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 SERPINA12Q8IW75 414 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 OR10V1Q8NGI7 309 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 TNFAIP8L1Q8WVP5 186 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 GPER1Q99527 375 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 GNG12Q9UBI6 72 aa9.74□□□□□ -0.85
SS18-219ENST00000581570 GABRPO00591 440 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 FKBP6O75344 327 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 DCTN3O75935 186 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 MT-ND4P03905 459 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 NDPQ00604 133 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 ZNF660Q6AZW8 331 aaPredicted RBP9.73□□□□□ -0.85
SS18-219ENST00000581570 TCTEX1D1Q8N7M0 179 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 CPNE2Q96FN4 548 aaPredicted RBP9.73□□□□□ -0.85
SS18-219ENST00000581570 NSL1Q96IY1 281 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 RHOVQ96L33 236 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 FAM192AQ9GZU8 254 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 IFT22Q9H7X7 185 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 ST3GAL6Q9Y274 331 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 ARL2BPQ9Y2Y0 163 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 A3GALT2U3KPV4 340 aa9.73□□□□□ -0.85
SS18-219ENST00000581570 OR4C45A6NMZ5 311 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms