RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 IQCF1Q8N6M8 205 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 ZNF565Q8N9K5 539 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 BBS1Q8NFJ9 593 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 OR10A7Q8NGE5 316 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 MRGPRDQ8TDS7 321 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 RCN3Q96D15 328 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 BORCS8Q96FH0 119 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 MROQ9BYG7 248 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 RANGRFQ9HD47 186 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 LAMP5Q9UJQ1 280 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 AP3M1Q9Y2T2 418 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 NUBP2Q9Y5Y2 271 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 V9GYQ6 96 aa5.73□□□□□ -1.49
SMARCE1-217ENST00000580654 LOC110117498-PIK3R3F6TDL0 507 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 HSPB6O14558 160 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CASQ2O14958 399 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 MAGEB4O15481 346 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 XRCC3O43542 346 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 ZNF254O75437 659 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 KDM4BO94953 1096 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 ZP3P21754 424 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 SLC2A5P22732 501 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 C21orf33P30042 268 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 HMGA2P52926 109 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 TPPP2P59282 170 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 ACTBP60709 375 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 PDZK1IP1Q13113 114 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 LSAMPQ13449 338 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 ZNF829Q3KNS6 432 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 RSBN1Q5VWQ0 802 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 HDXQ7Z353 690 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 ARPINQ7Z6K5 226 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 GVQW1Q8N7I0 195 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CHST4Q8NCG5 386 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CLRN3Q8NCR9 226 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 OR2K2Q8NGT1 345 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 PLPPR1Q8TBJ4 325 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 TSEN15Q8WW01 171 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 GGTLC1Q9BX51 225 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CHST5Q9GZS9 411 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 NCOR1P1Q9H4R4 102 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 KRT84Q9NSB2 600 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 NDE1Q9NXR1 346 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 SLC2A8Q9NY64 477 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 CNOT2Q9NZN8 540 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 OR52A1Q9UKL2 312 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 APLNQ9ULZ1 77 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 SAMD4AQ9UPU9 718 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 A3GALT2U3KPV4 340 aa5.72□□□□□ -1.49
SMARCE1-217ENST00000580654 IGHV3-43A0A0B4J1X8 118 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 TRAV24A0A0B4J272 114 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 A0A0G2JND7 137 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 BOLA2-SMG1P6H3BVE0 249 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 DEGS1O15121 323 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 E2F6O75461 281 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 CDK2AP2O75956 126 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 TRBV12-3P01733 135 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 MRPL3P09001 348 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 IGHV3-43DP0DP04 118 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 EDN2P20800 178 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 RBP2P50120 134 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 ALDH3A2P51648 485 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF134P52741 427 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF137PP52743 207 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 RIDAP52758 137 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 PPP1R8Q12972 351 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 APOFQ13790 326 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 C5orf64Q2M2E5 130 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 BCL2L15Q5TBC7 163 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 GLYATQ6IB77 296 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 LIN54Q6MZP7 749 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 CD200R1LQ6Q8B3 271 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 SLC25A48Q6ZT89 311 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 TMEM179BQ7Z7N9 219 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 CROCCP2Q86T23 111 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 Q8N1X5 172 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 C8orf31Q8N9H6 132 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 AQP11Q8NBQ7 271 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF439Q8NDP4 499 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 DNAAF1Q8NEP3 725 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 UBALD1Q8TB05 177 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 RFT1Q96AA3 541 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 PYURFQ96I23 114 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 APOL4Q9BPW4 351 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 FAM103A1Q9BTL3 118 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 YIPF3Q9GZM5 350 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 MOB1AQ9H8S9 216 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 TMBIM4Q9HC24 238 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 SAR1AQ9NR31 198 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 GAB2Q9UQC2 676 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 R4GMQ9 66 aa5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-217ENST00000580654 LOC102724200A0A096LPH7 203 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 C15orf65H3BRN8 121 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 FCN1O00602 326 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 NBR2O15453 112 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 SPRY2O43597 315 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 GATBO75879 557 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 NDUFA3O95167 84 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms