RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 WDR74Q6RFH5 385 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-207ENST00000580104 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-207ENST00000580104 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
TRAPPC8-207ENST00000580104 Q96M66 194 aa11.79□□□□□ -0.52
TRAPPC8-207ENST00000580104 TP53RKQ96S44 253 aa11.79□□□□□ -0.52
TRAPPC8-207ENST00000580104 SNRNP200O75643 2136 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 SCN5AQ14524 2016 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 PMELP40967 661 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 SLC35E1Q96K37 410 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 LYZL6O75951 148 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 F2RP25116 425 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 CDX1P47902 265 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 NPBWR2P48146 333 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 CMTM2Q8TAZ6 248 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 DTD1Q8TEA8 209 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 METTL1Q9UBP6 276 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 TRGC1P0CF51 173 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 EPHA8P29322 1005 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 IL11RAQ14626 422 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 MOB3AQ96BX8 217 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 SPSB2Q99619 263 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 KLF13Q9Y2Y9 288 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 M0R143 59 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 RALGAPA1Q6GYQ0 2036 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 RTN4RL2Q86UN3 420 aa11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 H1FOOQ8IZA3 346 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-207ENST00000580104 IGHV5-10-1A0A0J9YXX1 117 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 SELEP16581 610 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 FAM3BP58499 235 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 VAMP3Q15836 100 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 C21orf62-AS1Q17RA5 79 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 SMIM21Q3B7S5 101 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 PCGF1Q9BSM1 259 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 IL17BQ9UHF5 180 aa11.77□□□□□ -0.52
TRAPPC8-207ENST00000580104 TAS2R45P59539 299 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 DPPA3Q6W0C5 159 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 FAM173AQ9BQD7 235 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 SF3B5Q9BWJ5 86 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 SMOC1Q9H4F8 434 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 SPTBN2O15020 2390 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 A0A1B0GU03 582 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 A0A1B0GV90 55 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 HSPB1P04792 205 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 CRISP2P16562 243 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 SLC35E3Q7Z769 313 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 MESP1Q9BRJ9 268 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 A0A1B0GTQ1 180 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 AMTP48728 403 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF718Q3SXZ3 478 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 COMMD5Q9GZQ3 224 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 SMDT1Q9H4I9 107 aa11.77□□□□□ -0.53
TRAPPC8-207ENST00000580104 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 GYPAP02724 150 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 B2MP61769 119 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR5B21A6NL26 309 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 DDTP30046 118 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 HIKESHIQ53FT3 197 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 Q8IYB0 196 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 GAMTQ14353 236 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR2Y1Q8NGV0 311 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 TINAGQ9UJW2 476 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 GNG10P50151 68 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 TPRX1Q8N7U7 411 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 ABHD14AQ9BUJ0 271 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
TRAPPC8-207ENST00000580104 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 TOX4O94842 621 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 IGHMP01871 453 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 CORO2AQ92828 525 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 APC2O95996 2303 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 FGF16O43320 207 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 SYNGR1O43759 233 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 SELENOHQ8IZQ5 122 aaKnown RBP11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF319Q9P2F9 582 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 PHF3Q92576 2039 aaKnown RBP11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 TDHQ8IZJ6 230 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 SPRY3O43610 288 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 TIAF1O95411 115 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 GNG4P50150 75 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms