RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 LAMP3Q9UQV4 416 aa7.49□□□□□ -1.21
PPP4R1-213ENST00000579609 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-213ENST00000579609 MMP24Q9Y5R2 645 aa7.49□□□□□ -1.21
PPP4R1-213ENST00000579609 ESPL1Q14674 2120 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 SRRM5B3KS81 715 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 UMAD1C9J7I0 102 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 ITGB1BP1O14713 200 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 MLNRO43193 412 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TIMM8AO60220 97 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 PGLYRP1O75594 196 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 RHBDL1O75783 438 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 CRYAAP02489 173 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 ADH4P08319 380 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 FAM157CP0CG43 387 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 F2RL1P55085 397 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TMEM33P57088 247 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TAS2R30P59541 319 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 NKX6-1P78426 367 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 HTD2P86397 168 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 SRSF6Q13247 344 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TSC22D1Q15714 1073 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 CR1LQ2VPA4 569 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 MIDNQ504T8 468 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 WDR82Q6UXN9 313 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 ACP7Q6ZNF0 438 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 LYZL2Q7Z4W2 148 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 MYPOPQ86VE0 399 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 RBMXL3Q8N7X1 1067 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 SECTM1Q8WVN6 248 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 RDH5Q92781 318 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 CXorf58Q96LI9 332 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 RAB40CQ96S21 281 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 ZC4H2Q9NQZ6 224 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TAS2R3Q9NYW6 316 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 TRAPPC2LQ9UL33 140 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 FAM215AQ9Y5M1 114 aa7.48□□□□□ -1.21
PPP4R1-213ENST00000579609 SHANK1Q9Y566 2161 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 CDIPTO14735 213 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 HSPA12AO43301 675 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 PITX3O75364 302 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 GZMHP20718 246 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 MPV17P39210 176 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 UCNP55089 124 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 SELENOVP59797 346 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 PJVKQ0ZLH3 352 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 FOXF2Q12947 444 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 CATR1Q13166 79 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 SPATA46Q5T0L3 261 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 C10orf91Q5T1B1 145 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 ZNF66Q6ZN08 573 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 C11orf53Q8IXP5 236 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 OR2C3Q8N628 320 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 ZNF645Q8N7E2 425 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 NAXEQ8NCW5 288 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 LFNGQ8NES3 379 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 DMBX1Q8NFW5 382 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 GALMQ96C23 342 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 LYRM2Q9NU23 88 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 IL36RNQ9UBH0 155 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 FBXL17Q9UF56 701 aa7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-213ENST00000579609 CHD3Q12873 2000 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 IGKV1D-13A0A0B4J2D9 117 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 A0A1W2PR80 420 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 BTBD17A6NE02 478 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 FAM90A9PA6NNJ1 464 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 PRRG2O14669 202 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 HS3ST1O14792 307 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 KLK10O43240 276 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 DFFBO76075 338 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 SERPINE2P07093 398 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 IGKV1-13P0DP09 117 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 SPP1P10451 314 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 CAV2P51636 162 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 KLF3P57682 345 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 PDCD1Q15116 288 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 TESK1Q15569 626 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 BEX5Q5H9J7 111 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 DPPA3Q6W0C5 159 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 C20orf204Q6ZNR8 217 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 RELL2Q8NC24 303 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 PLPPR1Q8TBJ4 325 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 SUN5Q8TC36 379 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 Q8TCH9 128 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 CD300LFQ8TDQ1 290 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 TMED6Q8WW62 240 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 NINJ1Q92982 152 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 CYYR1Q96J86 154 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 SNX22Q96L94 193 aa7.46□□□□□ -1.22
PPP4R1-213ENST00000579609 ZNF488Q96MN9 340 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms