RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 H0YHG0 523 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 TMEM11P17152 192 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 RCC1P18754 421 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-212ENST00000578910 FUT3P21217 361 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 REG1BP48304 166 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 ZNF134P52741 427 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 AQP4P55087 323 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-212ENST00000578910 ZNF816Q0VGE8 651 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-212ENST00000578910 SPHARQ15513 63 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 C5orf24Q7Z6I8 188 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 UQCC2Q9BRT2 126 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 MND1Q9BWT6 205 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 LSM2Q9Y333 95 aaKnown RBP11.56□□□□□ -0.56
CCDC57-212ENST00000578910 MOB4Q9Y3A3 225 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 TGP01266 2768 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 IGHV3-72A0A0B4J1Y9 119 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 IGHV1-3A0A0C4DH29 117 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 CCRL2O00421 344 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 HSD17B6O14756 317 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-212ENST00000578910 GLAP06280 429 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 MAPK3P27361 379 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-212ENST00000578910 EBI3Q14213 229 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 IRF3Q14653 427 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 MED22Q15528 200 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 OR10K2Q6IF99 312 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 LRRTM1Q86UE6 522 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 GAPTQ8N292 157 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 NKAIN3Q8N8D7 197 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 C5orf56Q8N8D9 126 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 THRSPQ92748 146 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 Q96M66 194 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 TMED9Q9BVK6 235 aa11.55□□□□□ -0.56
CCDC57-212ENST00000578910 SLC31A2O15432 143 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 SPINT2O43291 252 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 SC5DO75845 299 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 HBZP02008 142 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 SRMP19623 302 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 SLC35A2P78381 396 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 GPR50Q13585 617 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 C1orf100Q5SVJ3 147 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 KPRPQ5T749 579 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-212ENST00000578910 CEACAM19Q7Z692 300 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 ZNF329Q86UD4 541 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 OR1L1Q8NH94 360 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 RBMXL1Q96E39 390 aaKnown RBP11.54□□□□□ -0.56
CCDC57-212ENST00000578910 EAF1Q96JC9 268 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-212ENST00000578910 DUSP21Q9H596 190 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 TAF9BQ9HBM6 251 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
CCDC57-212ENST00000578910 TSSC4Q9Y5U2 329 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-212ENST00000578910 LINC01548A6NM66 108 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 ZNF736B4DX44 427 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-212ENST00000578910 FGF16O43320 207 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 CA11O75493 328 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 MPIG6BO95866 241 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 VSIG8P0DPA2 414 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 CD37P11049 281 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 Q3ZCU0 254 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 MORN2Q502X0 79 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 C6orf183Q5T699 404 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 GLT8D1Q68CQ7 371 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
CCDC57-212ENST00000578910 OR10V1Q8NGI7 309 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 RTN4IP1Q8WWV3 396 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-212ENST00000578910 TMEM203Q969S6 136 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-212ENST00000578910 FAAP24Q9BTP7 215 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 LINC00527Q9UJ94 153 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 TPRKBQ9Y3C4 175 aa11.53□□□□□ -0.56
CCDC57-212ENST00000578910 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 NCBP2LA6PVI3 153 aaKnown RBP11.52□□□□□ -0.57
CCDC57-212ENST00000578910 PDCD6O75340 191 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 IGHG2P01859 326 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 UBBP0CG47 229 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 MYF6P23409 242 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 CD1BP29016 333 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 RBM48Q5RL73 367 aaKnown RBP11.52□□□□□ -0.57
CCDC57-212ENST00000578910 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 OR52L2PQ8NGH6 319 aa11.52□□□□□ -0.57
CCDC57-212ENST00000578910 OR2T10Q8NGZ9 312 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms