RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 OR10A7Q8NGE5 316 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 LINC01006Q8NI28 216 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 CAPSLQ8WWF8 208 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 FAM3DQ96BQ1 224 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 CYYR1Q96J86 154 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 NPFFR1Q9GZQ6 430 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 PLEKHJ1Q9NW61 149 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 STEAP1Q9UHE8 339 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 STUB1Q9UNE7 303 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 SSR3Q9UNL2 185 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 MMP24Q9Y5R2 645 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 C12orf77C9JDV5 145 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 ORC5O43913 435 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 GLAP06280 429 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 RCC1P18754 421 aaPredicted RBP15.71■□□□□ 0.11
SS18-209ENST00000578595 CD24P25063 80 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 OR10V1Q8NGI7 309 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 PIFOQ8TCI5 191 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 SULT4A1Q9BR01 284 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 FAAP24Q9BTP7 215 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 TM2D1Q9BX74 207 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 VCX3AQ9NNX9 186 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 ANK2Q01484 3957 aa15.71■□□□□ 0.11
SS18-209ENST00000578595 TRAV1-2A0A0B4J238 106 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 C15orf65H3BRN8 121 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 VEGFCP49767 419 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 QRFPP83859 136 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 MADCAM1Q13477 382 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 CCDC144NLQ6NUI1 221 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 CD200R1LQ6Q8B3 271 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 OR1L1Q8NH94 360 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 WFDC12Q8WWY7 111 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 LPAR5Q9H1C0 372 aa15.7■□□□□ 0.1
SS18-209ENST00000578595 TXNL4BQ9NX01 149 aaKnown RBP15.7■□□□□ 0.1
SS18-209ENST00000578595 LOC100506127A0A0U1RQW1 187 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 SOCS1O15524 211 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 HBZP02008 142 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 GALP22466 123 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 C2orf76Q3KRA6 126 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 OR2T6Q8NHC8 308 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 MRPL30Q8TCC3 161 aaKnown RBP15.69■□□□□ 0.1
SS18-209ENST00000578595 CHCHD6Q9BRQ6 235 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 LINC00574Q9H8X3 128 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 TAF9BQ9HBM6 251 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 GFOD1Q9NXC2 390 aa15.69■□□□□ 0.1
SS18-209ENST00000578595 TET2Q6N021 2002 aaPredicted RBP15.68■□□□□ 0.1
SS18-209ENST00000578595 A0A0A6YYD4 124 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 TMEM272A0A1B0GTI8 110 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 SHISA3A0PJX4 238 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 A6NDX4 124 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 TNFAIP8O95379 198 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 IL3RAP26951 378 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 DYNLT3P51808 116 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 CCBE1Q6UXH8 406 aaPredicted RBP15.68■□□□□ 0.1
SS18-209ENST00000578595 OR52M1Q8NGK5 317 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 OR51E2Q9H255 320 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 SIGLEC9Q9Y336 463 aa15.68■□□□□ 0.1
SS18-209ENST00000578595 IFITM5A6NNB3 132 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 OOSP1A8MZH6 123 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 PEX14O75381 377 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 TSPAN9O75954 239 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 CD37P11049 281 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 CD36P16671 472 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 SRSF4Q08170 494 aaKnown RBP15.67■□□□□ 0.1
SS18-209ENST00000578595 HES1Q14469 280 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 FAM53AQ6NSI3 398 aaPredicted RBP15.67■□□□□ 0.1
SS18-209ENST00000578595 SLC16A12Q6ZSM3 486 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 TSPAN14Q8NG11 270 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 OR56B1Q8NGI3 324 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 IL1F10Q8WWZ1 152 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 C16orf95Q9H693 158 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 RANBP3Q9H6Z4 567 aaPredicted RBP15.67■□□□□ 0.1
SS18-209ENST00000578595 LIN7BQ9HAP6 207 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 OR2S2Q9NQN1 319 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 ABRACLQ9P1F3 81 aa15.67■□□□□ 0.1
SS18-209ENST00000578595 A0A087WXM4 84 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 A0A0B4J203 849 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 HSD17B6O14756 317 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 SLC2A2P11168 524 aaPredicted RBP15.66■□□□□ 0.1
SS18-209ENST00000578595 REG1BP48304 166 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 MRPS15P82914 257 aaKnown RBP15.66■□□□□ 0.1
SS18-209ENST00000578595 TMEM30BQ3MIR4 351 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 GAPTQ8N292 157 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 OR56B4Q8NH76 319 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 AKR1E2Q96JD6 320 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 KCTD7Q96MP8 289 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 SLC25A33Q9BSK2 321 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 AK3Q9UIJ7 227 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 RAB22AQ9UL26 194 aa15.66■□□□□ 0.1
SS18-209ENST00000578595 A0A075B6Q4 140 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 TIMM23O14925 209 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 RRP9O43818 475 aaKnown RBP15.65■□□□□ 0.1
SS18-209ENST00000578595 GADD45AP24522 165 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 FGF9P31371 208 aaPredicted RBP15.65■□□□□ 0.1
SS18-209ENST00000578595 RAB7AP51149 207 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 LOXL3P58215 753 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 MXD1Q05195 221 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 PLA2G7Q13093 441 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 DIAPH2-AS1Q14236 149 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 Q6ZTK2 550 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms