RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SCN10AQ9Y5Y9 1956 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 K7EQM0 130 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 LINC01565O15544 149 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 RAMP1O60894 148 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 ELOBQ15370 118 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 MENTQ9BUN1 341 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 PSG11Q9UQ72 335 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 SBF1O95248 1867 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 PATJQ8NI35 1801 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 MEX3AA1L020 520 aaKnown RBP11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 A6NCN8 305 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR5B21A6NL26 309 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 KLRC4-KLRK1H3BQV0 150 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 CA11O75493 328 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 RAC3P60763 192 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 ERHP84090 104 aaKnown RBP11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 IGFBP7Q16270 282 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 ACSM6Q6P461 480 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 Q8WTZ3 238 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 BOD1Q96IK1 185 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 IGFBP3P17936 291 aaPredicted RBP11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 LRRC75AQ8NAA5 344 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 MUCL1Q96DR8 90 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 RASL10BQ96S79 203 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 LRFN3Q9BTN0 628 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 CD5P06127 495 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 BPIFB3P59826 476 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 UCN2Q96RP3 112 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 DEFB108AA8MXU0 73 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 SPINK2P20155 84 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 A0A087WWC5 75 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 COX7A2P2O60397 106 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 CASP6P55212 293 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 RHBDD2Q6NTF9 364 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 VASH2Q86V25 355 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 CARFQ8N187 725 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 GALNT14Q96FL9 552 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 CCDC74BQ96LY2 380 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
PCDHGB3-201ENST00000576222 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 H0Y980 276 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 M0R2Z0 102 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 CAMPP49913 170 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 LPAL2Q16609 132 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 RTL8BQ17RB0 113 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 SMIM21Q3B7S5 101 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR10D3Q8NH80 312 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 Q96M66 194 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 WFIKKN1Q96NZ8 548 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 GPHA2Q96T91 129 aa11.4□□□□□ -0.59
PCDHGB3-201ENST00000576222 DBX1A6NMT0 343 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 CTSBP07858 339 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 CYC1P08574 325 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 SLC25A47Q6Q0C1 308 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR8G5Q8NG78 346 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 SPCS3P61009 180 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 ZNF124Q15973 351 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 MARS2Q96GW9 593 aaKnown RBP11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 IER2Q9BTL4 223 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 MPC1Q9Y5U8 109 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 SCTP09683 121 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 BRS3P32247 399 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 IFI44Q8TCB0 444 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 POM121L2Q96KW2 1035 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 UBE2ZQ9H832 354 aaPredicted RBP11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 ZNF835Q9Y2P0 537 aa11.39□□□□□ -0.59
PCDHGB3-201ENST00000576222 PSME4Q14997 1843 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 NDUFB4O95168 129 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 PLPPR5Q32ZL2 321 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR2M3Q8NG83 312 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 ADIPOR1Q96A54 375 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR4C12Q96R67 309 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 SF3B5Q9BWJ5 86 aaKnown RBP11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 RBKSQ9H477 322 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGSF23A1L1A6 192 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 C17orf51A8MQB3 221 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 CD99P14209 185 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 AGAP20933 346 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 CXorf67Q86X51 503 aaPredicted RBP11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR2H1Q9GZK4 316 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 CEP290O15078 2479 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 FGF11Q92914 225 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 FAM173AQ9BQD7 235 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms