RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 OR1L1Q8NH94 360 aa7□□□□□ -1.29
NUP88-211ENST00000575976 NANPQ8TBE9 248 aa7□□□□□ -1.29
NUP88-211ENST00000575976 NUDCD2Q8WVJ2 157 aa7□□□□□ -1.29
NUP88-211ENST00000575976 KIRREL1Q96J84 757 aa7□□□□□ -1.29
NUP88-211ENST00000575976 SUCNR1Q9BXA5 334 aa7□□□□□ -1.29
NUP88-211ENST00000575976 BEX2Q9BXY8 128 aa7□□□□□ -1.29
NUP88-211ENST00000575976 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
NUP88-211ENST00000575976 TAF9BQ9HBM6 251 aa7□□□□□ -1.29
NUP88-211ENST00000575976 Q9N2K0 584 aa7□□□□□ -1.29
NUP88-211ENST00000575976 C12orf4Q9NQ89 552 aa7□□□□□ -1.29
NUP88-211ENST00000575976 EXTL2Q9UBQ6 330 aa7□□□□□ -1.29
NUP88-211ENST00000575976 ZNF230Q9UIE0 474 aaPredicted RBP7□□□□□ -1.29
NUP88-211ENST00000575976 MRPS7Q9Y2R9 242 aaKnown RBP7□□□□□ -1.29
NUP88-211ENST00000575976 SESN1Q9Y6P5 492 aa7□□□□□ -1.29
NUP88-211ENST00000575976 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.99□□□□□ -1.29
NUP88-211ENST00000575976 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 FAM172BPA6NC97 362 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 IGHV1-69P01742 117 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 HBZP02008 142 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 SCTP09683 121 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 HNF1AP20823 631 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 COX7A1P24310 79 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 FPR2P25090 351 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 NFYBP25208 207 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 TNFSF8P32971 234 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 TALDO1P37837 337 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 MNDAP41218 407 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 HLA-DRB3P79483 266 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 PITPNAQ00169 270 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 CNPY1Q3B7I2 92 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 UTF1Q5T230 341 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 GPR157Q5UAW9 335 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 RUSC1-AS1Q66K80 236 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 NCR3LG1Q68D85 454 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 CNIH2Q6PI25 160 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 TRAT1Q6PIZ9 186 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 ZNF554Q86TJ5 538 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 PNKDQ8N490 385 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 TEX29Q8N6K0 151 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 OR10A7Q8NGE5 316 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 MAFIPQ8WZ33 124 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 GCDHQ92947 438 aaPredicted RBP6.99□□□□□ -1.29
NUP88-211ENST00000575976 TMEM133Q9H2Q1 129 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 MMP27Q9H306 513 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 HEXA-AS1Q9H8Q6 139 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 KCNIP1Q9NZI2 227 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 CDC42EP3Q9UKI2 254 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 NUP50Q9UKX7 468 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 TMA7Q9Y2S6 64 aaKnown RBP6.99□□□□□ -1.29
NUP88-211ENST00000575976 SOX21Q9Y651 276 aaPredicted RBP6.99□□□□□ -1.29
NUP88-211ENST00000575976 A3GALT2U3KPV4 340 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 DSCAML1Q8TD84 2053 aa6.99□□□□□ -1.29
NUP88-211ENST00000575976 IGKV1D-8A0A087WSZ0 117 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 A0A087X0M5 115 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 IGHV2-26A0A0B4J1V2 119 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 IGHV3-43A0A0B4J1X8 118 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 A0A1B0GX30 115 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 MEIS3P1A6NDR6 274 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 TRDCB7Z8K6 153 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 F2RL2O00254 374 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 SDCBPO00560 298 aaPredicted RBP6.98□□□□□ -1.29
NUP88-211ENST00000575976 SPINT2O43291 252 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 CRLF1O75462 422 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 IGHV3-7P01780 117 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 FCER2P06734 321 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 GSTT2P0CG29 244 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 GSTT2BP0CG30 244 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 IGHV3-43DP0DP04 118 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 DTYMKP23919 212 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 CD34P28906 385 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 PRSS3P35030 304 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 UBE2E1P51965 193 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 LOXL3P58215 753 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 SRSF7Q16629 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
NUP88-211ENST00000575976 CHRFAM7AQ494W8 412 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 OR52W1Q6IF63 320 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 SNX29P2Q8IUI4 249 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 BCL6BQ8N143 479 aaPredicted RBP6.98□□□□□ -1.29
NUP88-211ENST00000575976 ABHD12Q8N2K0 398 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 GVQW1Q8N7I0 195 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 OR11H6Q8NGC7 330 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 OR52L2PQ8NGH6 319 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 OR13D1Q8NGV5 346 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 C22orf15Q8WYQ4 148 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 LEAP2Q969E1 77 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 DIRAS2Q96HU8 199 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 ST6GALNAC5Q9BVH7 336 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 ZNF286AQ9HBT8 521 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 RAB9BQ9NP90 201 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 ZNF69Q9UC07 566 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 MGAT4AQ9UM21 535 aa6.98□□□□□ -1.29
NUP88-211ENST00000575976 KIAA2026Q5HYC2 2103 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 MEIOCA2RUB1 952 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms