RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF565Q8N9K5 539 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 DRAXINQ8NBI3 349 aaPredicted RBP19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 OR1L1Q8NH94 360 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 IL1F10Q8WWZ1 152 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 NINJ1Q92982 152 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 NECAP2Q9NVZ3 263 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 ASH1LQ9NR48 2969 aaKnown RBP19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 hADV38S2A0JD32 116 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 BET1O15155 118 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 ZNF735P0CB33 412 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 GNB2P62879 340 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 ZNF273Q14593 569 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 CR1LQ2VPA4 569 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 OVCH2Q7RTZ1 564 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 FAM185AQ8N0U4 392 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 OR51S1Q8NGJ8 323 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 OR4A4PQ8NGN8 299 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 ARL11Q969Q4 196 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 KIAA2026Q5HYC2 2103 aa19.86■□□□□ 0.77
ATPAF1-213ENST00000574428 IGHV4-61A0A0C4DH41 118 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 HBZP02008 142 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 IFNA6P05013 189 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 LMO4P61968 165 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 MEF2CQ06413 473 aaPredicted RBP19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 TMEM200BQ69YZ2 307 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 RFESDQ8TAC1 157 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 SSBP3Q9BWW4 388 aaPredicted RBP19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 LINC00312Q9Y6C7 94 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 DSCAML1Q8TD84 2053 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 C15orf65H3BRN8 121 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 OR5H8P0DN80 308 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 NPY4RP50391 375 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 SCGB2B2Q4G0G5 96 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 ESCO2Q56NI9 601 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 TRAT1Q6PIZ9 186 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 OR6F1Q8NGZ6 308 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 CALYQ9NYX4 217 aa19.85■□□□□ 0.77
ATPAF1-213ENST00000574428 DISC1C4P0D8 188 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 GPR37O15354 613 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 GZMHP20718 246 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 EIF2B2P49770 351 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 TSPAN5P62079 268 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 CORO2AQ92828 525 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 C20orf85Q9H1P6 137 aa19.84■□□□□ 0.77
ATPAF1-213ENST00000574428 TRBV23-1A0A0A0MS06 115 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 DHFRP00374 187 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 H2AFB2P0C5Z0 115 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 CGB3P0DN86 165 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 CGB7P0DN87 165 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 IL2RGP31785 369 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 C17orf58Q2M2W7 97 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 Q5PR19 223 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 CABLES2Q9BTV7 478 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 TMPRSS13Q9BYE2 586 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 OR1A1Q9P1Q5 309 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 LPAR3Q9UBY5 353 aa19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 UBE2J1Q9Y385 318 aaPredicted RBP19.83■□□□□ 0.77
ATPAF1-213ENST00000574428 C22orf46C9J442 243 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 SPINT2O43291 252 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 CCL3L1P16619 93 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 OMGP23515 440 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 LTC4SQ16873 150 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 ARRDC1Q8N5I2 433 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 GALMQ96C23 342 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 SLC23A1Q9UHI7 598 aa19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 RPUSD1Q9UJJ7 312 aaKnown RBP19.83■□□□□ 0.76
ATPAF1-213ENST00000574428 KBTBD11-OT1A0A1B0GTJ5 212 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 A8MV72 311 aaPredicted RBP19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 NFYAP23511 347 aaPredicted RBP19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 RAG2P55895 527 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 FAM53AQ6NSI3 398 aaPredicted RBP19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 IDO2Q6ZQW0 420 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 RAB39BQ96DA2 213 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 ST6GAL2Q96JF0 529 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 GINS4Q9BRT9 223 aa19.82■□□□□ 0.76
ATPAF1-213ENST00000574428 MALRD1Q5VYJ5 2156 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 TRBV6-7A0A0A0MS04 114 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 A0A0A6YYJ9 748 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 CTXN2P0C2S0 81 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 ZFP36P26651 326 aaKnown RBP19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 FCGR2CP31995 323 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 OR10J5Q8NHC4 309 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF714Q96N38 554 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 PRRT1Q99946 306 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 SLC2A8Q9NY64 477 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 OPN4Q9UHM6 478 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 FLVCR2Q9UPI3 526 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 VPS13CQ709C8 3753 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 ITPR2Q14571 2701 aa19.81■□□□□ 0.76
ATPAF1-213ENST00000574428 C7orf66A4D0T2 115 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF729A6NN14 1252 aaPredicted RBP19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 KIAA1324LA8MWY0 1029 aaPredicted RBP19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 SLC25A16P16260 332 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 GNMTQ14749 295 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF660Q6AZW8 331 aaPredicted RBP19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 TMEM17Q86X19 198 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 OR52L2PQ8NGH6 319 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF2Q9BSG1 426 aaPredicted RBP19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 TAS2R3Q9NYW6 316 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 SCP2D1Q9UJQ7 156 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms