RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	CEBPD	P49716	269 aa	Predicted RBP	11.78	□□□□□ -0.52
ABR-223	ENST00000573895	ACTB	P60709	375 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	GUCA2A	Q02747	115 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	MADCAM1	Q13477	382 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	SLC9A3R2	Q15599	337 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	DEFB112	Q30KQ8	113 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	OLFML2A	Q68BL7	652 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	SLC35E4	Q6ICL7	350 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	BRICD5	Q6PL45	260 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	C12orf54	Q6X4T0	127 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	C17orf107	Q6ZR85	190 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	VMO1	Q7Z5L0	202 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	OR8H2	Q8N162	312 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	TMEM86B	Q8N661	226 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	ASCC1	Q8N9N2	400 aa	Known RBP	11.78	□□□□□ -0.52
ABR-223	ENST00000573895	OR52I2	Q8NH67	350 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	H1FX	Q92522	213 aa	Known RBP	11.78	□□□□□ -0.52
ABR-223	ENST00000573895	LHX4	Q969G2	390 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	SDHC	Q99643	169 aa	Predicted RBP	11.78	□□□□□ -0.52
ABR-223	ENST00000573895	PALMD	Q9NP74	551 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	ETAA1	Q9NY74	926 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	ONECUT1	Q9UBC0	465 aa		11.78	□□□□□ -0.52
ABR-223	ENST00000573895	RBMX2	Q9Y388	322 aa	Known RBP	11.78	□□□□□ -0.52
ABR-223	ENST00000573895	MEIOC	A2RUB1	952 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	ORC5	O43913	435 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	SSX5	O60225	188 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	UPK1B	O75841	260 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	NAPSA	O96009	420 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	HKR1	P10072	659 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	ERP29	P30040	261 aa	Known RBP	11.77	□□□□□ -0.53
ABR-223	ENST00000573895	OR3A1	P47881	315 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	INPP1	P49441	399 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	DGCR2	P98153	550 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	GRK1	Q15835	563 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895		Q6YL49	198 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	ZNF497	Q6ZNH5	498 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	TRAPPC6B	Q86SZ2	158 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	GAPT	Q8N292	157 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895		Q8N7P7	452 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	TMEM185A	Q8NFB2	350 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	OR4S1	Q8NGB4	309 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	DEDD2	Q8WXF8	326 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	ZDHHC16	Q969W1	377 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	PPA2	Q9H2U2	334 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	METTL8	Q9H825	291 aa	Known RBP	11.77	□□□□□ -0.53
ABR-223	ENST00000573895	C12orf4	Q9NQ89	552 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	MGAT4A	Q9UM21	535 aa		11.77	□□□□□ -0.53
ABR-223	ENST00000573895	TMEM30CP	A0ZSE6	113 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895		J3QRK9	145 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	MT-ND4	P03905	459 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	TFF1	P04155	84 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	PTHLH	P12272	177 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	IL7	P13232	177 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	NAT1	P18440	290 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	RCVRN	P35243	200 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	AP3S2	P59780	193 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	FOXL1	Q12952	345 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	DCTN2	Q13561	401 aa	Known RBP	11.76	□□□□□ -0.53
ABR-223	ENST00000573895	BAK1	Q16611	211 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	TRIQK	Q629K1	86 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	NCR3LG1	Q68D85	454 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	C16orf87	Q6PH81	154 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895		Q6ZS49	121 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	GDPD3	Q7L5L3	318 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	HOGA1	Q86XE5	327 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	NUDCD2	Q8WVJ2	157 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	TNFRSF14	Q92956	283 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.76	□□□□□ -0.53
ABR-223	ENST00000573895	IFT46	Q9NQC8	304 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	KLK11	Q9UBX7	282 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	ELF5	Q9UKW6	265 aa	Predicted RBP	11.76	□□□□□ -0.53
ABR-223	ENST00000573895	ANAPC10	Q9UM13	185 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895	SOX21	Q9Y651	276 aa	Predicted RBP	11.76	□□□□□ -0.53
ABR-223	ENST00000573895	POMT1	Q9Y6A1	747 aa		11.76	□□□□□ -0.53
ABR-223	ENST00000573895		A0A1W2PPH5	198 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895		A0A1W2PQ09	198 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	HSPB6	O14558	160 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	CSF1	P09603	554 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	KRBOX4	Q5JUW0	171 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.75	□□□□□ -0.53
ABR-223	ENST00000573895	RUSC1-AS1	Q66K80	236 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	ZNF880	Q6PDB4	577 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	MOB1B	Q7L9L4	216 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	ZNF554	Q86TJ5	538 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	RTN4RL2	Q86UN3	420 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	ZNF565	Q8N9K5	539 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	TMEM229B	Q8NBD8	167 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	ST6GALNAC5	Q9BVH7	336 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	NBEAL1	Q6ZS30	2694 aa		11.75	□□□□□ -0.53
ABR-223	ENST00000573895	MDFIC2	A0A1B0GVS7	189 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	RNASEK-C17orf49	H0YIS7	233 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	HOXA3	O43365	443 aa	Predicted RBP	11.74	□□□□□ -0.53
ABR-223	ENST00000573895	FCGR3A	P08637	254 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	TBP	P20226	339 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	GZMH	P20718	246 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	GDNF	P39905	211 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	UBE2E1	P51965	193 aa		11.74	□□□□□ -0.53
ABR-223	ENST00000573895	RPL15	P61313	204 aa	Known RBP	11.74	□□□□□ -0.53
ABR-223	ENST00000573895	RPL31	P62899	125 aa	Known RBP	11.74	□□□□□ -0.53
ABR-223	ENST00000573895	MEF2C	Q06413	473 aa	Predicted RBP	11.74	□□□□□ -0.53

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