RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 PITX3O75364 302 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 HEXAP06865 529 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 GRPP07492 148 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 SRSF3P84103 164 aaKnown RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 NHLH2Q02577 135 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 SWI5Q1ZZU3 235 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 ZNF718Q3SXZ3 478 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 Q6ZRG5 221 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 ZNF610Q8N9Z0 462 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 OR1A1Q9P1Q5 309 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 TINAGQ9UJW2 476 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 STRAPQ9Y3F4 350 aaKnown RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 GTF3C1Q12789 2109 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 POLR2GP62487 172 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
POLR2A-201ENST00000572844 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
POLR2A-201ENST00000572844 TMEM30CPA0ZSE6 113 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 OR5H1A6NKK0 313 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 IGLV2-14P01704 120 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 CD5P06127 495 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 CD200P41217 278 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 VAMP2P63027 116 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 BAXQ07812 192 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 MZT1Q08AG7 82 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 ZNF266Q14584 549 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 SLC35E4Q6ICL7 350 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 CLEC9AQ6UXN8 241 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 BHLHA15Q7RTS1 189 aaPredicted RBP13.75□□□□□ -0.21
POLR2A-201ENST00000572844 TOLLIPQ9H0E2 274 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 IGHV2OR16-5A0A0B4J2B6 119 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 FAM24AA6NFZ4 105 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 F8W036 122 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 TSPAN4O14817 238 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 TM4SF5O14894 197 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 SERPINE2P07093 398 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 MUC1P15941 1255 aaPredicted RBP13.75□□□□□ -0.21
POLR2A-201ENST00000572844 AKR1C2P52895 323 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 AKR1C1Q04828 323 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 CXorf66Q5JRM2 361 aaPredicted RBP13.75□□□□□ -0.21
POLR2A-201ENST00000572844 Q6ZS92 163 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 SEM1Q6ZVN7 128 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 TMEM252Q8N6L7 170 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 IL1F10Q8WWZ1 152 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 GPHA2Q96T91 129 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 LUZP4Q9P127 313 aa13.75□□□□□ -0.21
POLR2A-201ENST00000572844 IGHV1-18A0A0C4DH31 117 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 IGSF23A1L1A6 192 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 RNASEK-C17orf49H0YIS7 233 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 TNFSF12O43508 249 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 TIMM8AO60220 97 aaPredicted RBP13.74□□□□□ -0.21
POLR2A-201ENST00000572844 ACP7Q6ZNF0 438 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 OPN3Q9H1Y3 402 aaPredicted RBP13.74□□□□□ -0.21
POLR2A-201ENST00000572844 KCNIP1Q9NZI2 227 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
POLR2A-201ENST00000572844 TRIM77I1YAP6 450 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 SIGLEC5O15389 551 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 SSSCA1O60232 199 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 GCH1P30793 250 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 DVL1P1P54792 670 aaPredicted RBP13.73□□□□□ -0.21
POLR2A-201ENST00000572844 MSMO1Q15800 293 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 C3orf36Q3SXR2 165 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 Q6ZR03 302 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 PUSL1Q8N0Z8 303 aaKnown RBP13.73□□□□□ -0.21
POLR2A-201ENST00000572844 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 RNF115Q9Y4L5 304 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 SLC25A15Q9Y619 301 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 HSPA12AO43301 675 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 PSG2P11465 335 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 WDR82Q6UXN9 313 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
POLR2A-201ENST00000572844 LIN7CQ9NUP9 197 aaKnown RBP13.73□□□□□ -0.21
POLR2A-201ENST00000572844 URB1O60287 2271 aaKnown RBP13.72□□□□□ -0.21
POLR2A-201ENST00000572844 OOEPA6NGQ2 149 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 RNF212BA8MTL3 300 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 PSPNO60542 156 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 PAX5Q02548 391 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
POLR2A-201ENST00000572844 SEBOXQ9HB31 216 aaPredicted RBP13.72□□□□□ -0.21
POLR2A-201ENST00000572844 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 KIAA1324LA8MWY0 1029 aaPredicted RBP13.71□□□□□ -0.21
POLR2A-201ENST00000572844 WRBO00258 174 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 SNAPINO95295 136 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 CEACAM6P40199 344 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 GUCA2BQ16661 112 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 RAB40CQ96S21 281 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 LRFN3Q9BTN0 628 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
POLR2A-201ENST00000572844 OR14J1Q9UGF5 321 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.21
POLR2A-201ENST00000572844 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.21
POLR2A-201ENST00000572844 MUC6Q6W4X9 2439 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms