RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 NDUFB3O43676 98 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 CBX5P45973 191 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
RPAIN-209ENST00000571558 IFITM3Q01628 133 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 SSBP1Q04837 148 aaKnown RBP11.28□□□□□ -0.6
RPAIN-209ENST00000571558 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPAIN-209ENST00000571558 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 Q6ZS49 121 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 C22orf15Q8WYQ4 148 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 SNAPC3Q92966 411 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 Q9N2K0 584 aa11.28□□□□□ -0.6
RPAIN-209ENST00000571558 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-209ENST00000571558 IGKV1D-8A0A087WSZ0 117 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 ODAMA1E959 279 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 DNAJC9-AS1A6NH13 148 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 UPK1BO75841 260 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 RBBP9O75884 186 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.6
RPAIN-209ENST00000571558 GDNFP39905 211 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.6
RPAIN-209ENST00000571558 GDPD3Q7L5L3 318 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 NLRC3Q7RTR2 1065 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 TCF23Q7RTU1 214 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 LYSMD2Q8IV50 215 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 OR8B3Q8NGG8 313 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 OR4K15Q8NH41 348 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 MAFIPQ8WZ33 124 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 BORCS5Q969J3 196 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 OR8B2Q96RD0 313 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 NUP50Q9UKX7 468 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.6
RPAIN-209ENST00000571558 MEIKINA0A087WXM9 373 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ANKRD20A5PA0PJZ0 165 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 GPR37O15354 613 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CGB3P0DN86 165 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CGB7P0DN87 165 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 NDUFB7P17568 137 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 RCVRNP35243 200 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 NPY4RP50391 375 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ACTBP60709 375 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CHMP1AQ9HD42 196 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ING3Q9NXR8 418 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 WNK2Q9Y3S1 2297 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 FUOMA2VDF0 154 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 FOXH1O75593 365 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 EDDM3BP56851 147 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 BAMBIQ13145 260 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 KLF9Q13886 244 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-209ENST00000571558 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 OR52W1Q6IF63 320 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 OR13A1Q8NGR1 328 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CCDC107Q8WV48 283 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CORO2AQ92828 525 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 IFT46Q9NQC8 304 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 CLN8Q9UBY8 286 aa11.26□□□□□ -0.61
RPAIN-209ENST00000571558 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 A8MXK9 166 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 FCER2P06734 321 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
RPAIN-209ENST00000571558 HMGN3Q15651 99 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 C11orf91Q3C1V1 193 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TRIQKQ629K1 86 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 BTN2A1Q7KYR7 527 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 BEST4Q8NFU0 473 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 C8orf46Q8TAG6 207 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 DACT3Q96B18 629 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-209ENST00000571558 SSBP3Q9BWW4 388 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-209ENST00000571558 LINC00574Q9H8X3 128 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 ABCB10Q9NRK6 738 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TAS2R8Q9NYW2 309 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
RPAIN-209ENST00000571558 MEX3AA1L020 520 aaKnown RBP11.24□□□□□ -0.61
RPAIN-209ENST00000571558 C22orf46C9J442 243 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 C12orf77C9JDV5 145 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 C15orf65H3BRN8 121 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms