RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KRTAP21-3Q3LHN1 58 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 FAM120AOSQ5T036 256 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 AVPI1Q5T686 147 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 LIPNQ5VXI9 398 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 TTC23Q5W5X9 447 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 FAHD2BQ6P2I3 314 aaPredicted RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 BTNL3Q6UXE8 466 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 Q6ZR03 302 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 CEACAM19Q7Z692 300 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ZNF573Q86YE8 665 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ELMOD2Q8IZ81 293 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ACBD7Q8N6N7 88 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 YIPF7Q8N8F6 280 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR10H4Q8NGA5 316 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR56B2PQ8NGI1 322 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR5A2Q8NGI9 324 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR51G2Q8NGK0 314 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR2AE1Q8NHA4 323 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 CLDND2Q8NHS1 167 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ZNF671Q8TAW3 534 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 NANPQ8TBE9 248 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ITLN1Q8WWA0 313 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 FAHD2AQ96GK7 314 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 RNF170Q96K19 258 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 TECTBQ96PL2 329 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR8B4Q96RC9 309 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ALKBH7Q9BT30 221 aaPredicted RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 PBOV1Q9GZY1 135 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ZNF665Q9H7R5 613 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 DCLRE1BQ9H816 532 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 RNPEPL1Q9HAU8 725 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PLEKHA1Q9HB21 404 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ADGRL4Q9HBW9 690 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 NEK6Q9HC98 313 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 INPP5EQ9NRR6 644 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 DCAF16Q9NXF7 216 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 UBAP1Q9NZ09 502 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ERVK-18Q9QC07 812 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR5V1Q9UGF6 321 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ENPP5Q9UJA9 477 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 RHBDD3Q9Y3P4 386 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 RPL36Q9Y3U8 105 aaKnown RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4AQ9Y536 164 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 R4GMQ9 66 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 MED13LQ71F56 2210 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 A0A1W2PQL4 384 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 CCDC182A6NF36 153 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OOEPA6NGQ2 149 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ZNF850A8MQ14 1090 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 A8MU10 97 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PRSS46E5RG02 174 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 H0YL77 283 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 LGALS8O00214 317 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 DLGAP1O14490 977 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 MLNRO43193 412 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 SYT7O43581 403 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 FCGR3BO75015 233 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ENTPD6O75354 484 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 GATBO75879 557 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 DHRS3O75911 302 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 RPP14O95059 124 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 PTBP3O95758 552 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 ECDO95905 644 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 CYB5R3P00387 301 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 NRASP01111 189 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 IGHV2-5P01817 119 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 MT-ND2P03891 347 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 UBCP0CG48 685 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 DBTP11182 482 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 RPS2P15880 293 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 MYL12AP19105 171 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 AZU1P20160 251 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 FLNAP21333 2647 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 IL2RGP31785 369 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 POLR2IP36954 125 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 CFHR2P36980 270 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 GBX2P52951 348 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 GNB2P62879 340 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 GNG3P63215 75 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PRDX4Q13162 271 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 MAB21L1Q13394 359 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 RCN1Q15293 331 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ZMYND11Q15326 602 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 LRRC36Q1X8D7 754 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 CEACAM21Q3KPI0 293 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ZNF404Q494X3 552 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 TMEM255AQ5JRV8 349 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 CLVS2Q5SYC1 327 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 TMEM244Q5VVB8 128 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 TMPRSS11AQ6ZMR5 421 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 SLC36A1Q7Z2H8 476 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 SYS1Q8N2H4 156 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 DHRSXQ8N5I4 330 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR1M1Q8NGA1 313 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR8B12Q8NGG6 310 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR8B3Q8NGG8 313 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR10Z1Q8NGY1 313 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 RHOXF1Q8NHV9 184 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms