RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TMEM65Q6PI78 240 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ATRAIDQ6UW56 229 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 KIRREL2Q6UWL6 708 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 PAMR1Q6UXH9 720 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 LINC00114Q6XXX2 140 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZNF730Q6ZMV8 503 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TMPPEQ6ZT21 453 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SLC25A48Q6ZT89 311 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 SLC16A13Q7RTY0 426 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FAM19A5Q7Z5A7 132 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 GPR135Q8IZ08 494 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TCTE3Q8IZS6 198 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ARIH2OSQ8N7S6 290 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TCEANCQ8N8B7 351 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZNF383Q8NA42 475 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 PNLDC1Q8NA58 520 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 ADAD2Q8NCV1 583 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 ST6GALNAC3Q8NDV1 305 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 OR6F1Q8NGZ6 308 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 OR5J2Q8NH18 312 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 OR4C3Q8NH37 302 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 NPRL2Q8WTW4 380 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FGF11Q92914 225 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZNF837Q96EG3 531 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 MRAP2Q96G30 205 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ADTRPQ96IZ2 230 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 LOXL4Q96JB6 756 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 GFM1Q96RP9 751 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 CMSS1Q9BQ75 279 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 GINS3Q9BRX5 216 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 NIPSNAP3BQ9BS92 247 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CHST5Q9GZS9 411 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FAM234AQ9H0X4 552 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZNF665Q9H7R5 613 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FGF20Q9NP95 211 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 ENY2Q9NPA8 101 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CISD1Q9NZ45 108 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 DNAJC27Q9NZQ0 273 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 PRO0628Q9UI54 55 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FBXL4Q9UKA2 621 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 RARRES3Q9UL19 164 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SSR3Q9UNL2 185 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TP53TG1Q9Y2A0 90 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 AK6Q9Y3D8 172 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 LOXL2Q9Y4K0 774 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 RTTNQ86VV8 2226 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 IGLV3-12A0A075B6K2 115 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TRAV27A0A087WT01 109 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 A0A1B0GWA3 101 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZC3H12DA2A288 527 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 TRAPPC13A5PLN9 417 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SERINC4A6NH21 518 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 IDSB3KWA1 339 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 F6UZH7 168 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 M0R082 166 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 M0R143 59 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TAAR5O14804 337 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 FABP7O15540 132 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 REM1O75628 298 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 OR7C1O76099 320 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 MT-CO3P00414 261 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 GCGP01275 180 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ARG1P05089 322 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 UMODP07911 640 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 IFI6P09912 130 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 RFPL3SP0C7P2 107 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SULT1A3P0DMM9 295 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SULT1A4P0DMN0 295 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 MYL12AP19105 171 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TBPP20226 339 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SLC2A5P22732 501 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 GRPRP30550 384 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PYCR1P32322 319 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 NKX2-1P43699 371 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 EVX1P49640 407 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 GAS1P54826 345 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 FOXG1P55316 489 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 CLDN17P56750 224 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 FBXW4P57775 412 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 HILS1P60008 231 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 RPS18P62269 152 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 RPS4XP62701 263 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 RHOBP62745 196 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PPP3R1P63098 170 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ARG2P78540 354 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 CDK5Q00535 292 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 IFITM3Q01628 133 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PNRC1Q12796 327 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 GPR50Q13585 617 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 FHL1Q13642 323 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 KLF5Q13887 457 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 EBPQ15125 230 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 PMVKQ15126 192 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ELAVL1Q15717 326 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF141Q15928 474 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 C3AR1Q16581 482 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF239Q16600 458 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 HLA-DRB5Q30154 266 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 GAGE13Q4V321 117 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms