RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TSPAN5P62079 268 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 LOXL1Q08397 574 aaPredicted RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF273Q14593 569 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 CDK10Q15131 360 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 HMGN3Q15651 99 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 SRSF7Q16629 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 LTC4SQ16873 150 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 PRAMEF5Q5TYX0 476 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 METTL11BQ5VVY1 283 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 STEAP3Q658P3 488 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR52W1Q6IF63 320 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 STEAP1BQ6NZ63 245 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 MZT2BQ6NZ67 158 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF841Q6ZN19 808 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 DNM1P46Q6ZS02 220 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 GLCCI1Q86VQ1 547 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 GAPTQ8N292 157 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 FGFRL1Q8N441 504 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 KIR3DL3Q8N743 410 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 GVQW1Q8N7I0 195 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR10J5Q8NHC4 309 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 DEDD2Q8WXF8 326 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ARL11Q969Q4 196 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 KIRREL1Q96J84 757 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 SOSTQ9BQB4 213 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 NCOR1P1Q9H4R4 102 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 PALMDQ9NP74 551 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 MBNL3Q9NUK0 354 aaKnown RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 TAS2R3Q9NYW6 316 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF69Q9UC07 566 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 SLC23A1Q9UHI7 598 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 OPN4Q9UHM6 478 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 JPT1Q9UK76 154 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 RBM7Q9Y580 266 aaKnown RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 TANC2Q9HCD6 1990 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 CADP27708 2225 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRAV20A0A0B4J274 112 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV2-70DA0A0C4DH43 119 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 KBTBD11-OT1A0A1B0GTJ5 212 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ANKRD20A5PA0PJZ0 165 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 FAM172BPA6NC97 362 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 NAP1L6A6NFF2 107 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 C22orf46C9J442 243 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 M0QYG6 137 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 M0R1W7 72 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 DIRAS3O95661 229 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 HBZP02008 142 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 PMP2P02689 132 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 RBP4P02753 201 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 CD3DP04234 171 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 AMY2AP04746 511 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 INHBBP09529 407 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR5H8P0DN80 308 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 CCL3L1P16619 93 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 OMGP23515 440 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZBTB25P24278 435 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 FPR2P25090 351 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 NFYBP25208 207 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 DYRK1AQ13627 763 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 BAK1Q16611 211 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 SCGB2B2Q4G0G5 96 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 DCAF12L2Q5VW00 463 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF880Q6PDB4 577 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 Q6ZS49 121 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ARRDC1Q8N5I2 433 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 LINC01356Q8N9X3 169 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 TMEM229BQ8NBD8 167 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR5AP2Q8NGF4 316 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR10V1Q8NGI7 309 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 C8orf46Q8TAG6 207 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 UBALD1Q8TB05 177 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ENKURQ8TC29 256 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 SNAPC3Q92966 411 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 PRRT1Q99946 306 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 C7orf50Q9BRJ6 194 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 CABLES2Q9BTV7 478 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR2S2Q9NQN1 319 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 IDI2-AS1Q9NZ38 188 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 SCP2D1Q9UJQ7 156 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 KCNS2Q9ULS6 477 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 ANAPC10Q9UM13 185 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 RBMX2Q9Y388 322 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 PRR14LQ5THK1 2151 aa5.43□□□□□ -1.54
CTDNEP1-204ENST00000570484 HRNRQ86YZ3 2850 aaPredicted RBP5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV3-43A0A0B4J1X8 118 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 KIAA1324LA8MWY0 1029 aaPredicted RBP5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 FAM157AC9JC47 383 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 LYRM1O43325 122 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 LANCL1O43813 399 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 TOX4O94842 621 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 SCTP09683 121 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 GSTT2P0CG29 244 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV3-43DP0DP04 118 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 NAT1P18440 290 aa5.42□□□□□ -1.54
CTDNEP1-204ENST00000570484 GATA3P23771 443 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms