RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 BAXQ07812 192 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 CLN3Q13286 438 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 GCNT2Q8N0V5 402 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 TPRX1Q8N7U7 411 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 LAMP3Q9UQV4 416 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 SPTA1P02549 2419 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 LILRA1O75019 489 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 IL2RGP31785 369 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 HOXA4Q00056 320 aaPredicted RBP13.12□□□□□ -0.31
USP43-202ENST00000570475 OBP2BQ9NPH6 170 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 DFFBO76075 338 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 DEFA4P12838 97 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 AGAP20933 346 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 CEACAM6P40199 344 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 S100A12P80511 92 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 CDPF1Q6NVV7 123 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 ZNF709Q8N972 641 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 KCNE4Q8WWG9 221 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 FRZBQ92765 325 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 NINJ1Q92982 152 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 ATP5SQ99766 215 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 SF3B5Q9BWJ5 86 aaKnown RBP13.12□□□□□ -0.31
USP43-202ENST00000570475 Q9N2K0 584 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 KLF2Q9Y5W3 355 aaPredicted RBP13.12□□□□□ -0.31
USP43-202ENST00000570475 CACNA1HO95180 2353 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 A0A0G2JRQ6 117 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 CLEC18AA5D8T8 446 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 PITX3O75364 302 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 TFF1P04155 84 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 F2RP25116 425 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 UBE2G2P60604 165 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
USP43-202ENST00000570475 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 CLEC18CQ8NCF0 446 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 OR4D5Q8NGN0 318 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 TMEM37Q8WXS4 190 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 HINT2Q9BX68 163 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 GFOD1Q9NXC2 390 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 KIAA1456Q9P272 454 aa13.12□□□□□ -0.31
USP43-202ENST00000570475 METTL1Q9UBP6 276 aaKnown RBP13.12□□□□□ -0.31
USP43-202ENST00000570475 UBE2CO00762 179 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
USP43-202ENST00000570475 DUSP3P51452 185 aaPredicted RBP13.11□□□□□ -0.31
USP43-202ENST00000570475 ARG2P78540 354 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
USP43-202ENST00000570475 ZNF716A6NP11 495 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 CDIPTO14735 213 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 PGA5P0DJD9 388 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 EDDM3AQ14507 147 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 C20orf204Q6ZNR8 217 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 WFIKKN1Q96NZ8 548 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 ABCA1O95477 2261 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 PCNX1Q96RV3 2341 aa13.11□□□□□ -0.31
USP43-202ENST00000570475 SYNGR2O43760 224 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 CA11O75493 328 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
USP43-202ENST00000570475 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 LOXL2Q9Y4K0 774 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 NBASA2RRP1 2371 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 NDUFS6O75380 124 aaKnown RBP13.1□□□□□ -0.31
USP43-202ENST00000570475 GABRA2P47869 451 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 HBG1P69891 147 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 HBG2P69892 147 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 LRP11Q86VZ4 500 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 M1APQ8TC57 530 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 ETV2O00321 342 aaPredicted RBP13.1□□□□□ -0.31
USP43-202ENST00000570475 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
USP43-202ENST00000570475 ICAM4Q14773 271 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 HERPUD1Q15011 391 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 WDR54Q9H977 334 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 KCNIP1Q9NZI2 227 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 ABI3Q9P2A4 366 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
USP43-202ENST00000570475 NBEAQ8NFP9 2946 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 FAM157AC9JC47 383 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 TAS2R30P59541 319 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 FGF12P61328 243 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 Q6ZPA2 131 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms