RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SCAF4O95104 1147 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 NXPH2O95156 264 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 IGLV1-44P01699 117 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SEC11BP0C7V7 166 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 HKR1P10072 659 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 GCH1P30793 250 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 GNRHRP30968 328 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 KIR2DL2P43627 348 aaPredicted RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 SULT1A2P50226 295 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 F2RL1P55085 397 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 RPS23P62266 143 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 PMP22Q01453 160 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 PAX5Q02548 391 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 BAXQ07812 192 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 DEFB109BQ30KR1 87 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SMIM21Q3B7S5 101 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 ZNF718Q3SXZ3 478 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 IGSF11Q5DX21 431 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 BEX5Q5H9J7 111 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 FAM74A1Q5RGS3 127 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 MBNL2Q5VZF2 373 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 TMEM268Q5VZI3 342 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 ZNF497Q6ZNH5 498 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 Q6ZS92 163 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 TBC1D26Q86UD7 250 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 FAM90A1Q86YD7 464 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 H1FOOQ8IZA3 346 aaPredicted RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 GCNT2Q8N0V5 402 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 TCTEX1D1Q8N7M0 179 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SLC35G3Q8N808 338 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 CNEP1R1Q8N9A8 125 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 RELL2Q8NC24 303 aaPredicted RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 GALNT11Q8NCW6 608 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 OR8G5Q8NG78 346 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 OR4D5Q8NGN0 318 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SLC25A40Q8TBP6 338 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 MRPL30Q8TCC3 161 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 SECTM1Q8WVN6 248 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 PCNPQ8WW12 178 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 TMED6Q8WW62 240 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 DYRK2Q92630 601 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SMIM8Q96KF7 97 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 OR2J1Q9GZK6 312 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 TLNRD1Q9H1K6 362 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 CXXC4Q9H2H0 198 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 LIME1Q9H400 295 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 RAB9BQ9NP90 201 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 PARP11Q9NR21 331 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 CYTL1Q9NRR1 136 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 FAM212BQ9NTI7 297 aaPredicted RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 MBNL3Q9NUK0 354 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 ASF1BQ9NVP2 202 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 KCNIP1Q9NZI2 227 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 TAAR3PQ9P1P4 343 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 FBXL17Q9UF56 701 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 WIPI2Q9Y4P8 454 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 SPEF1Q9Y4P9 236 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 LSM5Q9Y4Y9 91 aaKnown RBP4.87□□□□□ -1.63
CDH13-213ENST00000569454 PCNX2A6NKB5 2137 aa4.87□□□□□ -1.63
CDH13-213ENST00000569454 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ATRQ13535 2644 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ARHGAP21Q5T5U3 1957 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 A0A1B0GU03 582 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 TMEM30CPA0ZSE6 113 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZSCAN5BA6NJL1 495 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF705EA8MWA4 302 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 TRIM77I1YAP6 450 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 TIMM8AO60220 97 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 PITX3O75364 302 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 SERPINE2P07093 398 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 SCTP09683 121 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF250P15622 560 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 F2RP25116 425 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 LMO1P25800 156 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 TIMP3P35625 211 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 NKX2-1P43699 371 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 NOVA1P51513 510 aaKnown RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 TMEM33P57088 247 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 VAMP2P63027 116 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 PJVKQ0ZLH3 352 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF154Q13106 437 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 HERPUD1Q15011 391 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 HMGN3Q15651 99 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 TSC22D1Q15714 1073 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 KRTCAP3Q53RY4 240 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 NMSQ5H8A3 153 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 Q6P435 159 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 MEX3BQ6ZN04 569 aaKnown RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 BHLHA15Q7RTS1 189 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 LYZL2Q7Z4W2 148 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 SVBPQ8N300 66 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 C9orf106Q8NAJ2 232 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 SCCPDHQ8NBX0 429 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 LFNGQ8NES3 379 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 OR10V1Q8NGI7 309 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms