RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ADAM30Q9UKF2 790 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 MGAT4AQ9UM21 535 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 DSCAML1Q8TD84 2053 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 HBZP02008 142 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 FCGR3AP08637 254 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 SRD5A1P18405 259 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 COX7A1P24310 79 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 FPR2P25090 351 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 NFYBP25208 207 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 BPIFB3P59826 476 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 LTC4SQ16873 150 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 PNKDQ8N490 385 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 OR1L1Q8NH94 360 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 NUDCD2Q8WVJ2 157 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 SUCNR1Q9BXA5 334 aa13.67□□□□□ -0.22
COMMD4-224ENST00000568877 WNK2Q9Y3S1 2297 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 A0A087X0M5 115 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 A0A1B0GX30 115 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 F2RL2O00254 374 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 SSX5O60225 188 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 DTYMKP23919 212 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 BRD3OSQ6XYD6 125 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 MMP27Q9H306 513 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 ZNF230Q9UIE0 474 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-224ENST00000568877 MRPS7Q9Y2R9 242 aaKnown RBP13.66□□□□□ -0.22
COMMD4-224ENST00000568877 A3GALT2U3KPV4 340 aa13.66□□□□□ -0.22
COMMD4-224ENST00000568877 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 A0A1W2PRD5 423 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 A0A1W2PRF3 423 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 A0A1W2PRM7 423 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 FAM172BPA6NC97 362 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 TRDCB7Z8K6 153 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 SDCBPO00560 298 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-224ENST00000568877 HLA-DQB1P01920 261 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 PTHLHP12272 177 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 CD34P28906 385 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 LOXL3P58215 753 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 HLA-DRB3P79483 266 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 SRSF7Q16629 238 aaKnown RBP eCLIP13.65□□□□□ -0.22
COMMD4-224ENST00000568877 TMEM30BQ3MIR4 351 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 RUSC1-AS1Q66K80 236 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 OR11H6Q8NGC7 330 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 OR52M1Q8NGK5 317 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 GALMQ96C23 342 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 CLEC7AQ9BXN2 247 aa13.65□□□□□ -0.22
COMMD4-224ENST00000568877 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-224ENST00000568877 NPFFO15130 113 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 SCTP09683 121 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 FAM157CP0CG43 387 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 EPHA1P21709 976 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 PRSS3P35030 304 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 HTD2P86397 168 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 SCGB2A2Q13296 93 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 MADCAM1Q13477 382 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 UTF1Q5T230 341 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 MAFIPQ8WZ33 124 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 ST6GALNAC5Q9BVH7 336 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 ZNF286AQ9HBT8 521 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
COMMD4-224ENST00000568877 IGHV3-43A0A0B4J1X8 118 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 ODF3BA8MYP8 253 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 TOR1AO14656 332 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 TPPPO94811 219 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 ARG1P05089 322 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 IGHV3-43DP0DP04 118 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 TNFSF8P32971 234 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 KIR2DS4P43632 304 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 MIDNQ504T8 468 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 ZNF626Q68DY1 528 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 Q6ZS49 121 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 BCL6BQ8N143 479 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-224ENST00000568877 IL1F10Q8WWZ1 152 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 C22orf15Q8WYQ4 148 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 DIRAS2Q96HU8 199 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 OCSTAMPQ9BR26 566 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 PSG11Q9UQ72 335 aa13.63□□□□□ -0.23
COMMD4-224ENST00000568877 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 FABP7O15540 132 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 GSTT2P0CG29 244 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 GSTT2BP0CG30 244 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 SAA4P35542 130 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 CBX5P45973 191 aa13.62□□□□□ -0.23
COMMD4-224ENST00000568877 LGALS4P56470 323 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms