RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 POM121CA8CG34 1229 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 MFNGO00587 321 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 TMEM127O75204 238 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 PAHP00439 452 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 ARG1P05089 322 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
RNF40-211ENST00000567365 RPS19P39019 145 aaKnown RBP10.03□□□□□ -0.8
RNF40-211ENST00000567365 NCS1P62166 190 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 HMGN3Q15651 99 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 Q3ZCU0 254 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 FAM53AQ6NSI3 398 aaPredicted RBP10.03□□□□□ -0.8
RNF40-211ENST00000567365 C5orf24Q7Z6I8 188 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 C8orf31Q8N9H6 132 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 ZNF439Q8NDP4 499 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 OR5H6Q8NGV6 325 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 LGALS14Q8TCE9 139 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 ARL11Q969Q4 196 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 NAA50Q9GZZ1 169 aaKnown RBP10.03□□□□□ -0.8
RNF40-211ENST00000567365 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.03□□□□□ -0.8
RNF40-211ENST00000567365 PLEKHJ1Q9NW61 149 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 GFOD1Q9NXC2 390 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 AK3Q9UIJ7 227 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 PSG11Q9UQ72 335 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 FAM96BQ9Y3D0 163 aa10.03□□□□□ -0.8
RNF40-211ENST00000567365 J3QR06 171 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 HBZP02008 142 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 DYNLT3P51808 116 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 FAM189A2Q15884 450 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 OLFML2AQ68BL7 652 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 C16orf87Q6PH81 154 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 TRAT1Q6PIZ9 186 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 Q6ZTK2 550 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 LINC00311Q8N616 119 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 OR10R2Q8NGX6 335 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 OR9G1Q8NH87 305 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 OR1L1Q8NH94 360 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 HDHD3Q9BSH5 251 aaPredicted RBP10.02□□□□□ -0.81
RNF40-211ENST00000567365 TAF9BQ9HBM6 251 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 DPM3Q9P2X0 92 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
RNF40-211ENST00000567365 TMEM89A2RUT3 159 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 HKR1P10072 659 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 HIST1H1DP16402 221 aaKnown RBP10.01□□□□□ -0.81
RNF40-211ENST00000567365 NFYBP25208 207 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 HTR1DP28221 377 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 COMPP49747 757 aaPredicted RBP10.01□□□□□ -0.81
RNF40-211ENST00000567365 LGALS4P56470 323 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
RNF40-211ENST00000567365 HTD2P86397 168 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 DYNC1I2Q13409 638 aaKnown RBP10.01□□□□□ -0.81
RNF40-211ENST00000567365 LRRC75BQ2VPJ9 315 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 CROCCP3Q8IVE0 287 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 OR5R1Q8NH85 324 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 SLC25A46Q96AG3 418 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 RAB3CQ96E17 227 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 SSX3Q99909 188 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 MMP28Q9H239 520 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 DPAGT1Q9H3H5 408 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 RIMS4Q9H426 269 aaPredicted RBP10.01□□□□□ -0.81
RNF40-211ENST00000567365 VPREB3Q9UKI3 123 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
RNF40-211ENST00000567365 METTL21EPA6NDL7 271 aa10□□□□□ -0.81
RNF40-211ENST00000567365 SPINT2O43291 252 aa10□□□□□ -0.81
RNF40-211ENST00000567365 GPR137BO60478 399 aa10□□□□□ -0.81
RNF40-211ENST00000567365 ZNF137PP52743 207 aa10□□□□□ -0.81
RNF40-211ENST00000567365 RPL15P61313 204 aaKnown RBP10□□□□□ -0.81
RNF40-211ENST00000567365 VBP1P61758 197 aa10□□□□□ -0.81
RNF40-211ENST00000567365 RELBQ01201 579 aa10□□□□□ -0.81
RNF40-211ENST00000567365 SSX2Q16385 188 aa10□□□□□ -0.81
RNF40-211ENST00000567365 IDNKQ5T6J7 187 aa10□□□□□ -0.81
RNF40-211ENST00000567365 MOB1BQ7L9L4 216 aa10□□□□□ -0.81
RNF40-211ENST00000567365 ST6GALNAC6Q969X2 333 aa10□□□□□ -0.81
RNF40-211ENST00000567365 Q9N2K0 584 aa10□□□□□ -0.81
RNF40-211ENST00000567365 C12orf4Q9NQ89 552 aa10□□□□□ -0.81
RNF40-211ENST00000567365 RHBDL2Q9NX52 303 aa10□□□□□ -0.81
RNF40-211ENST00000567365 ABRACLQ9P1F3 81 aa10□□□□□ -0.81
RNF40-211ENST00000567365 SPATA2Q9UM82 520 aa10□□□□□ -0.81
RNF40-211ENST00000567365 IGHV3-43A0A0B4J1X8 118 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 FAM181BA6NEQ2 426 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 SERPINE3A8MV23 424 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 LEUTXA8MZ59 168 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 H3BUX3 64 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 SDCBPO00560 298 aaPredicted RBP9.99□□□□□ -0.81
RNF40-211ENST00000567365 SLC31A2O15432 143 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 IGHV3-7P01780 117 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 IGHV3-43DP0DP04 118 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 GNB3P16520 340 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 ZNF134P52741 427 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 PRRX1P54821 245 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 GNMTQ14749 295 aa9.99□□□□□ -0.81
RNF40-211ENST00000567365 LTC4SQ16873 150 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms