RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HLA-DRB3P79483 266 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 PRB3Q04118 309 aaPredicted RBP9.4□□□□□ -0.9
KARS-207ENST00000566560 C17orf58Q2M2W7 97 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 NCR3LG1Q68D85 454 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 CNIH2Q6PI25 160 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 Q6ZPA2 131 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 IL17RELQ6ZVW7 336 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 PRR18Q8N4B5 295 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 TEX29Q8N6K0 151 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 UBALD1Q8TB05 177 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 AUNIPQ9H7T9 357 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 MBNL3Q9NUK0 354 aaKnown RBP9.4□□□□□ -0.9
KARS-207ENST00000566560 KCNIP1Q9NZI2 227 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 ELF5Q9UKW6 265 aaPredicted RBP9.4□□□□□ -0.9
KARS-207ENST00000566560 SESN1Q9Y6P5 492 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 A3GALT2U3KPV4 340 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 FN1P02751 2386 aaKnown RBP9.39□□□□□ -0.91
KARS-207ENST00000566560 INAFM1C9JVW0 142 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 C15orf65H3BRN8 121 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 SPINT2O43291 252 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 ORC5O43913 435 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 PTHLHP12272 177 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 DTYMKP23919 212 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 PRTN3P24158 256 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 COX7A1P24310 79 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 S100A5P33763 92 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 PITPNAQ00169 270 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 KLRD1Q13241 179 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 LTC4SQ16873 150 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 CNPY1Q3B7I2 92 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 ZNF880Q6PDB4 577 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 HEPN1Q6WQI6 88 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 C1orf122Q6ZSJ8 110 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 SNX29P2Q8IUI4 249 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 PDZD9Q8IXQ8 264 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 C11orf42Q8N5U0 333 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 GCDHQ92947 438 aaPredicted RBP9.39□□□□□ -0.91
KARS-207ENST00000566560 LHX4Q969G2 390 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 ARL11Q969Q4 196 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 DIRAS2Q96HU8 199 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 KIRREL1Q96J84 757 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 MMP27Q9H306 513 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 UNKLQ9H9P5 680 aaKnown RBP9.39□□□□□ -0.91
KARS-207ENST00000566560 TAF9BQ9HBM6 251 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 Q9N2K0 584 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
KARS-207ENST00000566560 MRPS7Q9Y2R9 242 aaKnown RBP9.39□□□□□ -0.91
KARS-207ENST00000566560 IGHV3OR16-10A0A075B7F0 116 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 NPIPB11E5RHQ5 1161 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 SSX5O60225 188 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 MMP23AO75900 390 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 HBZP02008 142 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 CGB3P0DN86 165 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 CGB7P0DN87 165 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 IGHV4-38-2P0DP08 117 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 GZMHP20718 246 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 NFYBP25208 207 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 SRP14P37108 136 aaKnown RBP9.38□□□□□ -0.91
KARS-207ENST00000566560 GDNFP39905 211 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 KIR2DS4P43632 304 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 KIR2DS1Q14954 304 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 HMGN3Q15651 99 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 GPR157Q5UAW9 335 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 BAIAP2L2Q6UXY1 529 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 OR1L1Q8NH94 360 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 NANPQ8TBE9 248 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 MAFIPQ8WZ33 124 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 TNFRSF14Q92956 283 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 SUCNR1Q9BXA5 334 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 LINC00574Q9H8X3 128 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
KARS-207ENST00000566560 CDC42EP3Q9UKI2 254 aa9.38□□□□□ -0.91
KARS-207ENST00000566560 MEIS3P1A6NDR6 274 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 RNASEK-C17orf49H0YIS7 233 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 SDCBPO00560 298 aaPredicted RBP9.37□□□□□ -0.91
KARS-207ENST00000566560 FSHBP01225 129 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 MELTFP08582 738 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 FPR2P25090 351 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 PRSS3P35030 304 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 IL18Q14116 193 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 KLF17Q5JT82 389 aaPredicted RBP9.37□□□□□ -0.91
KARS-207ENST00000566560 RUSC1-AS1Q66K80 236 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 PNKDQ8N490 385 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 OR10A7Q8NGE5 316 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 OR13D1Q8NGV5 346 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 IL1F10Q8WWZ1 152 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 HEXA-AS1Q9H8Q6 139 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 ZNF286AQ9HBT8 521 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 IFT46Q9NQC8 304 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
KARS-207ENST00000566560 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
KARS-207ENST00000566560 IGHV3-43A0A0B4J1X8 118 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms