RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 IRF4Q15306 451 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 HIST3H3Q16695 136 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM241Q24JQ0 296 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF658BQ4V348 819 aaPredicted RBP2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 MPV17L2Q567V2 206 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 MESTQ5EB52 335 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM162BQ5T6X4 162 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 ZC2HC1BQ5TFG8 222 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 LYPD2Q6UXB3 125 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 Q6ZTC4 211 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 HIST2H3AQ71DI3 136 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 TAC4Q86UU9 113 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 CALHM3Q86XJ0 350 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 PDPNQ86YL7 162 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF584Q8IVC4 421 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 C11orf53Q8IXP5 236 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 TYMSOSQ8TAI1 123 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 TMBIM1Q969X1 311 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 SMARCD1Q96GM5 515 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 BMFQ96LC9 184 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 PRSS27Q9BQR3 290 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 MED18Q9BUE0 208 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC17A9Q9BYT1 436 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 ZSCAN16Q9H4T2 348 aaPredicted RBP2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 POMPQ9Y244 141 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM32AQ9Y421 112 aaKnown RBP2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 TRIOBPQ9H2D6 2365 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 SYCP2Q9BX26 1530 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF532Q9HCE3 1301 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 SPTBN5Q9NRC6 3674 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 KIF15Q9NS87 1388 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 KIDINS220Q9ULH0 1771 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ADGRB3O60242 1522 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 DYSFO75923 2080 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A087WUJ7 227 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 LOC102724200A0A096LPH7 203 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 IGKV6D-21A0A0A0MT36 114 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CCL15-CCL14A0A0B4J2E2 113 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A1W2PPR1 153 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 PRSS44E7EML9 344 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TRAF3IP2O43734 574 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 COX7A2P2O60397 106 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 YIF1AO95070 293 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CECR9P0C854 216 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SCGB1C2P0DMR2 95 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CRISP2P16562 243 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CD36P16671 472 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF708P17019 499 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 IL3RAP26951 378 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC6A1P30531 599 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CRIP2P52943 208 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 MP68P56378 58 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 PPP1CAP62136 330 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 RAP1AP62834 184 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 JOSD1Q15040 202 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SSX1Q16384 188 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CCL15Q16663 113 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ARHGAP11BQ3KRB8 267 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 HIGD2BQ4VC39 106 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM222AQ5U5X8 452 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF544Q6NX49 715 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SFXN4Q6P4A7 337 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM205Q6UW68 189 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ATP5L2Q7Z4Y8 100 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ITPRIPQ8IWB1 547 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC35F6Q8N357 371 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 DCAF4L2Q8NA75 395 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SUMF2Q8NBJ7 301 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 OR10G4Q8NGN3 311 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNRF2Q8NHG8 242 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SCGB1C1Q8TD33 95 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TNFAIP8L1Q8WVP5 186 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 MRPL48Q96GC5 212 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM109Q9BVC6 243 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 KIFC1Q9BW19 673 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 GGTLC1Q9BX51 225 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TBL1XR1Q9BZK7 514 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ULBP3Q9BZM4 244 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 FGF23Q9GZV9 251 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 TLNRD1Q9H1K6 362 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ENY2Q9NPA8 101 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 PARP11Q9NR21 331 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 NYAP2Q9P242 653 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 PAK5Q9P286 719 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 OR12D3Q9UGF7 316 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF391Q9UJN7 358 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF225Q9UK10 706 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 PKIGQ9Y2B9 76 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 CASP8AP2Q9UKL3 1982 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 LTBP1Q14766 1721 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 SCN2AQ99250 2005 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 NOTCH4Q99466 2003 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 NRXN3Q9Y4C0 1643 aa2.39□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A1W2PP64 1363 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms