RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ZNF816Q0VGE8 651 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 HNF4GQ14541 408 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 SPHARQ15513 63 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 KPRPQ5T749 579 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 CENPVQ7Z7K6 275 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 OR8H3Q8N146 312 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 MS4A15Q8N5U1 240 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 NKAIN3Q8N8D7 197 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 OR10X1Q8NGY0 326 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 OR4K15Q8NH41 348 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 OR1L1Q8NH94 360 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 ST6GALNAC6Q969X2 333 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 FAM46BQ96A09 425 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 RBMXL1Q96E39 390 aaKnown RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 TMED9Q9BVK6 235 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 DUSP21Q9H596 190 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 IGHV1-3A0A0C4DH29 117 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 UBE2QL1A1L167 161 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 FAM90A10PA6NDY2 464 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 FAM90A7PA6NKC0 464 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 FAM90A23PA8MXZ1 464 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 HSD17B6O14756 317 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 IGKV1D-33P01593 117 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 IGKV1-33P01594 117 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 CD37P11049 281 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 FUT3P21217 361 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 MYF6P23409 242 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 MAPK3P27361 379 aaPredicted RBP11.62□□□□□ -0.55
FANCA-220ENST00000566409 EBI3Q14213 229 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 OR10K2Q6IF99 312 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 C8orf31Q8N9H6 132 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 MYDGFQ969H8 173 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 TRAPPC2LQ9UL33 140 aa11.62□□□□□ -0.55
FANCA-220ENST00000566409 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 M0QZK8 103 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 CCRL2O00421 344 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 HBZP02008 142 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 GAPDHP04406 335 aaKnown RBP11.61□□□□□ -0.55
FANCA-220ENST00000566409 VSIG8P0DPA2 414 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 TMEM11P17152 192 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 GPR50Q13585 617 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 HES1Q14469 280 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 MED22Q15528 200 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 CT45A1Q5HYN5 189 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 C9orf152Q5JTZ5 239 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 C1orf100Q5SVJ3 147 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 LIPKQ5VXJ0 399 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 CEACAM19Q7Z692 300 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 OR4F17Q8NGA8 305 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 CT45A3Q8NHU0 189 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 PHYHIPQ92561 330 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 THRSPQ92748 146 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 OR4F4Q96R69 305 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 KCNK15Q9H427 330 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
FANCA-220ENST00000566409 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 ZNF736B4DX44 427 aaPredicted RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 PDCD6O75340 191 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 MPIG6BO95866 241 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 GLAP06280 429 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 UCHL1P09936 223 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 SRMP19623 302 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 UNC119Q13432 240 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 MOB3BQ86TA1 216 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 PRR18Q8N4B5 295 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 Q8N6K4 173 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 OR10V1Q8NGI7 309 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 MRPL30Q8TCC3 161 aaKnown RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 RTN4IP1Q8WWV3 396 aaPredicted RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 TMEM203Q969S6 136 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 GFI1Q99684 422 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 SULT4A1Q9BR01 284 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 ANKRD60Q9BZ19 345 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 MBNL3Q9NUK0 354 aaKnown RBP11.6□□□□□ -0.55
FANCA-220ENST00000566409 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
FANCA-220ENST00000566409 TCRBV4S1A1TA0A5B7 111 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 SPINT2O43291 252 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 FGF16O43320 207 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 CA11O75493 328 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 CHATP28329 748 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 HTR2CP28335 458 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 ZNF137PP52743 207 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 QRFPP83859 136 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 TPBGQ13641 420 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 Q3ZCU0 254 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 RBM48Q5RL73 367 aaKnown RBP11.59□□□□□ -0.55
FANCA-220ENST00000566409 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 Q6ZPA2 131 aa11.59□□□□□ -0.55
FANCA-220ENST00000566409 WFDC9Q8NEX5 89 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms