RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
CDH3-204ENST00000565453 PF4V1P10720 104 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 IGLL1P15814 213 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 REG1BP48304 166 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 GP2P55259 537 aaKnown RBP12.39□□□□□ -0.43
CDH3-204ENST00000565453 HNF4GQ14541 408 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 SIGIRRQ6IA17 410 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 TFAP2CQ92754 450 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 EAF1Q96JC9 268 aaPredicted RBP12.39□□□□□ -0.43
CDH3-204ENST00000565453 Q96M66 194 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 BANF2Q9H503 90 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 AURKAIP1Q9NWT8 199 aaPredicted RBP12.39□□□□□ -0.43
CDH3-204ENST00000565453 ETAA1Q9NY74 926 aa12.39□□□□□ -0.43
CDH3-204ENST00000565453 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 SLC31A2O15432 143 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 IGHG2P01859 326 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 MGMTP16455 207 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 CD33P20138 364 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 SYT6Q5T7P8 510 aaPredicted RBP12.38□□□□□ -0.43
CDH3-204ENST00000565453 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 UNQ9370/PRO34162Q6UXP9 181 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 SLC25A48Q6ZT89 311 aaKnown RBP12.38□□□□□ -0.43
CDH3-204ENST00000565453 MOB3BQ86TA1 216 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 ZNF329Q86UD4 541 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 NKAIN3Q8N8D7 197 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 NOL4LQ96MY1 436 aaPredicted RBP12.38□□□□□ -0.43
CDH3-204ENST00000565453 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 SELENOIQ9C0D9 397 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
CDH3-204ENST00000565453 HBZP02008 142 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 PF4P02776 101 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 GLAP06280 429 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 CDK1P06493 297 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 VHLP40337 213 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 ZNF134P52741 427 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 ZNF137PP52743 207 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 INSL4Q14641 139 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 TMEM30BQ3MIR4 351 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 C6orf183Q5T699 404 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 ETV3LQ6ZN32 361 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 OR1L1Q8NH94 360 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 CHPT1Q8WUD6 406 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
CDH3-204ENST00000565453 SGCDQ92629 289 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 THRSPQ92748 146 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 MBNL3Q9NUK0 354 aaKnown RBP12.37□□□□□ -0.43
CDH3-204ENST00000565453 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
CDH3-204ENST00000565453 LSM2Q9Y333 95 aaKnown RBP12.37□□□□□ -0.43
CDH3-204ENST00000565453 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 CA11O75493 328 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 CRTAPO75718 401 aaPredicted RBP12.36□□□□□ -0.43
CDH3-204ENST00000565453 RCC1P18754 421 aaPredicted RBP12.36□□□□□ -0.43
CDH3-204ENST00000565453 FUT3P21217 361 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 IL3RAP26951 378 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 MAPK3P27361 379 aaPredicted RBP12.36□□□□□ -0.43
CDH3-204ENST00000565453 CD1BP29016 333 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 ACSM3Q53FZ2 586 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 CT45A1Q5HYN5 189 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 TRAT1Q6PIZ9 186 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 LRRTM1Q86UE6 522 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 LINC00482Q8N8I6 264 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 Q8N9W7 124 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 CT45A3Q8NHU0 189 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 ERGIC3Q9Y282 383 aa12.36□□□□□ -0.43
CDH3-204ENST00000565453 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 ZNF736B4DX44 427 aaPredicted RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 SPINT2O43291 252 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 PDCD6O75340 191 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 SLC35A2P78381 396 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 C6orf141Q5SZD1 244 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 FAM27D1Q5T7N8 215 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 C18orf65Q6ZTR6 163 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 STPG2Q8N412 459 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 OR10V1Q8NGI7 309 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 MRPL30Q8TCC3 161 aaKnown RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 RCC1LQ96I51 464 aaKnown RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 RAB9BQ9NP90 201 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 LIN7CQ9NUP9 197 aaKnown RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 GNG12Q9UBI6 72 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
CDH3-204ENST00000565453 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
CDH3-204ENST00000565453 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 CD37P11049 281 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms