RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 HLA-DMAP28067 261 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 IL2RGP31785 369 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 TAS2R46P59540 309 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 CR1LQ2VPA4 569 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 ACTBL2Q562R1 376 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 OR13A1Q8NGR1 328 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 OR5H2Q8NGV7 314 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 ARL11Q969Q4 196 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 TAS2R3Q9NYW6 316 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 ANXA10Q9UJ72 324 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 RPUSD1Q9UJJ7 312 aaKnown RBP13.98□□□□□ -0.17
CMTM3-208ENST00000564247 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 DSCAML1Q8TD84 2053 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 ANKRD20A5PA0PJZ0 165 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF729A6NN14 1252 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-208ENST00000564247 CENPXA8MT69 81 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 FABP7O15540 132 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 LIPFP07098 398 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 GSTT2P0CG29 244 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 TBPP20226 339 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 FAUP35544 74 aaKnown RBP13.97□□□□□ -0.17
CMTM3-208ENST00000564247 HLA-DRB3P79483 266 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 OR52W1Q6IF63 320 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 LYSMD2Q8IV50 215 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 PRR18Q8N4B5 295 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 OR5AP2Q8NGF4 316 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 OR4A4PQ8NGN8 299 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 C8orf46Q8TAG6 207 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 TRIM63Q969Q1 353 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 DMRTB1Q96MA1 342 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF714Q96N38 554 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 KCNS2Q9ULS6 477 aa13.97□□□□□ -0.17
CMTM3-208ENST00000564247 KBTBD11-OT1A0A1B0GTJ5 212 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 hCG_1809904A0A1W2PP81 198 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 A0A1W2PPE2 198 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 A0A1W2PR64 198 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 A0A1W2PRV1 198 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 MEX3AA1L020 520 aaKnown RBP13.96□□□□□ -0.17
CMTM3-208ENST00000564247 A8MXK9 166 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 C12orf77C9JDV5 145 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 ENSAO43768 121 aaKnown RBP13.96□□□□□ -0.17
CMTM3-208ENST00000564247 TGFAP01135 160 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 IFNA6P05013 189 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 SCTP09683 121 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 AKAIN1P0CW23 69 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 LCN2P80188 198 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 DCTN2Q13561 401 aaKnown RBP13.96□□□□□ -0.17
CMTM3-208ENST00000564247 MEF2DQ14814 521 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 HMGN3Q15651 99 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 RNASE10Q5GAN6 216 aaKnown RBP13.96□□□□□ -0.17
CMTM3-208ENST00000564247 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 LINC01356Q8N9X3 169 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 DEDD2Q8WXF8 326 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 SNAPC3Q92966 411 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 GALMQ96C23 342 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 PALMDQ9NP74 551 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 NECAP2Q9NVZ3 263 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 CALYQ9NYX4 217 aa13.96□□□□□ -0.17
CMTM3-208ENST00000564247 CUBNO60494 3623 aa13.96□□□□□ -0.18
CMTM3-208ENST00000564247 IGKV1D-8A0A087WSZ0 117 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 LINC00854A0A1B0GVQ3 168 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 FAM157AC9JC47 383 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 RAB3DO95716 219 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 HBZP02008 142 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 PMP2P02689 132 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 CD3DP04234 171 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 ZNF728P0DKX0 622 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 CGB3P0DN86 165 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 CGB7P0DN87 165 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
CMTM3-208ENST00000564247 DEFA1P59665 94 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 DEFA3P59666 94 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 DYRK1AQ13627 763 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 ZNF273Q14593 569 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 CDK10Q15131 360 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 Q6ZPA2 131 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 LY6G5BQ8NDX9 201 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 RFESDQ8TAC1 157 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
CMTM3-208ENST00000564247 C7orf50Q9BRJ6 194 aaKnown RBP13.95□□□□□ -0.18
CMTM3-208ENST00000564247 POLR3KQ9Y2Y1 108 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-208ENST00000564247 KIAA1324LA8MWY0 1029 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-208ENST00000564247 B4DSR2 109 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 DISC1C4P0D8 188 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 HSPA12AO43301 675 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 CD74P04233 296 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 HRH1P35367 487 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 TSPAN5P62079 268 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 KLF9Q13886 244 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-208ENST00000564247 TMEM30BQ3MIR4 351 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 BTNL3Q6UXE8 466 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 OR1L1Q8NH94 360 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 OR10J5Q8NHC4 309 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 KIRREL1Q96J84 757 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 ARHGAP32A7KAX9 2087 aa13.94□□□□□ -0.18
CMTM3-208ENST00000564247 MXRA5Q9NR99 2828 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms