RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NOL4LQ96MY1 436 aaPredicted RBP9.03□□□□□ -0.96
RNF40-204ENST00000563683 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 NKX2-6A6NCS4 301 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 UMODP07911 640 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 ZNF17P17021 662 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 FGF7P21781 194 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 ZXDAP98168 799 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 PDZD11Q5EBL8 140 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 Q8WTZ3 238 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 A0A0A6YYD4 124 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 C5orf63A6NC05 138 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 ZNF816Q0VGE8 651 aaPredicted RBP9.02□□□□□ -0.96
RNF40-204ENST00000563683 ZNF429Q86V71 674 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 FAM185AQ8N0U4 392 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 SLC35G3Q8N808 338 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 GNPNAT1Q96EK6 184 aaPredicted RBP9.02□□□□□ -0.96
RNF40-204ENST00000563683 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.96
RNF40-204ENST00000563683 RIMS4Q9H426 269 aaPredicted RBP9.02□□□□□ -0.96
RNF40-204ENST00000563683 PPP1R14DQ9NXH3 145 aa9.02□□□□□ -0.96
RNF40-204ENST00000563683 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 B4DEV8 164 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 CDIPTO14735 213 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 DLK1P80370 383 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 TMEM267Q0VDI3 215 aaPredicted RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 RNPS1Q15287 305 aaKnown RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 CDCP2Q5VXM1 449 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 C1orf87Q8N0U7 546 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 IMMP1LQ96LU5 166 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 PSENENQ9NZ42 101 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 C2orf16Q68DN1 1984 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 SPTBN1Q01082 2364 aaKnown RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 MKRN2OSH3BPM6 223 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 DNPH1O43598 174 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 IGHV3-13P01766 116 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 IGHV3-7P01780 117 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 DTYMKP23919 212 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 CEACAM6P40199 344 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 DEFB109BQ30KR1 87 aa9.02□□□□□ -0.97
RNF40-204ENST00000563683 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 HEYLQ9NQ87 328 aaPredicted RBP9.02□□□□□ -0.97
RNF40-204ENST00000563683 DIDO1Q9BTC0 2240 aaKnown RBP9.01□□□□□ -0.97
RNF40-204ENST00000563683 CRYM-AS1A6NIL9 109 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 MBPP02686 304 aaPredicted RBP9.01□□□□□ -0.97
RNF40-204ENST00000563683 TRGC2P03986 189 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 SOD3P08294 240 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 PPP1CCP36873 323 aaKnown RBP9.01□□□□□ -0.97
RNF40-204ENST00000563683 GLIPR1P48060 266 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 RBM11P57052 281 aaKnown RBP9.01□□□□□ -0.97
RNF40-204ENST00000563683 KIAA1456Q9P272 454 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 DEFB108AA8MXU0 73 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 M0R296 226 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 CHST1O43916 411 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 NGFP01138 241 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 CXCL1P09341 107 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 SCTP09683 121 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 H2BFWTQ7Z2G1 175 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 PPP1R32Q7Z5V6 425 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 SLC35E3Q7Z769 313 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 DMRTC2Q8IXT2 367 aaPredicted RBP9.01□□□□□ -0.97
RNF40-204ENST00000563683 Q96M66 194 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 RARRES2Q99969 163 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 MYO7BQ6PIF6 2116 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 K7N7A8 449 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 SPINT2O43291 252 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 CELA3AP09093 270 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 LMO1P25800 156 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 ADIRFQ15847 76 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 CLEC12BQ2HXU8 276 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 TMEM251Q8N6I4 163 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 FAM210BQ96KR6 192 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 TMEM68Q96MH6 324 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 TTTY12Q9BZ98 90 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 WNT5BQ9H1J7 359 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 WFDC1Q9HC57 220 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 PITPNC1Q9UKF7 332 aa9.01□□□□□ -0.97
RNF40-204ENST00000563683 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
RNF40-204ENST00000563683 C10orf128Q5T292 105 aa9□□□□□ -0.97
RNF40-204ENST00000563683 DEFB124Q8NES8 71 aa9□□□□□ -0.97
RNF40-204ENST00000563683 OR10V1Q8NGI7 309 aa9□□□□□ -0.97
RNF40-204ENST00000563683 FRZBQ92765 325 aa9□□□□□ -0.97
RNF40-204ENST00000563683 SH3BGRL3Q9H299 93 aa9□□□□□ -0.97
RNF40-204ENST00000563683 PCDH15Q96QU1 1955 aa9□□□□□ -0.97
RNF40-204ENST00000563683 TGIF2-C20orf24A0A0A6YYL0 155 aa9□□□□□ -0.97
RNF40-204ENST00000563683 B4E171 279 aa9□□□□□ -0.97
RNF40-204ENST00000563683 TRGC1P0CF51 173 aa9□□□□□ -0.97
RNF40-204ENST00000563683 TSPAN7P41732 249 aa9□□□□□ -0.97
RNF40-204ENST00000563683 H3F3AP84243 136 aa9□□□□□ -0.97
RNF40-204ENST00000563683 PMP22Q01453 160 aa9□□□□□ -0.97
RNF40-204ENST00000563683 TMEM211Q6ICI0 200 aa9□□□□□ -0.97
RNF40-204ENST00000563683 ZNF343Q6P1L6 599 aa9□□□□□ -0.97
RNF40-204ENST00000563683 LHX4Q969G2 390 aa9□□□□□ -0.97
RNF40-204ENST00000563683 IL17BQ9UHF5 180 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms