RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ATP6V1C2Q8NEY4 427 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 DDI1Q8WTU0 396 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 ITLN2Q8WWU7 325 aaPredicted RBP1□□□□□ -2.25
HMGB1P33-201ENST00000563485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1□□□□□ -2.25
HMGB1P33-201ENST00000563485 TAMM41Q96BW9 452 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 CMTM5Q96DZ9 223 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 MARVELD1Q9BSK0 173 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 TAPBPLQ9BX59 468 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 BEX2Q9BXY8 128 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 GNB1LQ9BYB4 327 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 CHST5Q9GZS9 411 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 TMEM216Q9P0N5 145 aa1□□□□□ -2.25
HMGB1P33-201ENST00000563485 TBL2Q9Y4P3 447 aaKnown RBP1□□□□□ -2.25
HMGB1P33-201ENST00000563485 ABCC11Q96J66 1382 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZBED9Q6R2W3 1325 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 GOLGA8KD6RF30 607 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 F5H5P2 479 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 C3orf84H3BNL1 204 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 GOLGA8MH3BSY2 632 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 SLC16A4O15374 487 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 CRTAPO75718 401 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 IGHG2P01859 326 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 PFN1P07737 140 aaKnown RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 CD28P10747 220 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 MLNP12872 115 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 PVALBP20472 110 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 F8A1P23610 371 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 PSMA1P25786 263 aaKnown RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 AGTR1P30556 359 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 HSPA13P48723 471 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 ACOT2P49753 483 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 FOXA1P55317 472 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 SNAP25P60880 206 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 CASP8Q14790 479 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 EBPQ15125 230 aaKnown RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 HENMT1Q5T8I9 393 aaKnown RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TBPL2Q6SJ96 375 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TCF24Q7RTU0 167 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 OLIG3Q7RTU3 272 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 C10orf107Q8IVU9 208 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 AMN1Q8IY45 258 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 CPNE9Q8IYJ1 553 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZFP82Q8N141 532 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 C2orf73Q8N5S3 287 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TMEM251Q8N6I4 163 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 KRTCAP2Q8N6L1 136 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 DNAAF3Q8N9W5 541 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 GATD1Q8NB37 220 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 BPIFB6Q8NFQ5 453 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR8S1Q8NH09 359 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TWIST2Q8WVJ9 160 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 RNF133Q8WVZ7 376 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 GALMQ96C23 342 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 C8orf76Q96K31 380 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 GPR22Q99680 433 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 SEC22CQ9BRL7 303 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 ANAPC13Q9BS18 74 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 POTEKPQ9BYX7 375 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 METTL9Q9H1A3 318 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TXNIPQ9H3M7 391 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 VSIRQ9H7M9 311 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TRIM45Q9H8W5 580 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 UCK1Q9HA47 277 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 DMAC2Q9NW81 257 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TAS2R13Q9NYV9 303 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TAS2R1Q9NYW7 299 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 POMPQ9Y244 141 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 TRAPPC1Q9Y5R8 145 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 NUP205Q92621 2012 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 PLB1Q6P1J6 1458 aa0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 BAZ1BQ9UIG0 1483 aaKnown RBP0.99□□□□□ -2.25
HMGB1P33-201ENST00000563485 NPATQ14207 1427 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 C9orf84Q5VXU9 1444 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 SETD1AO15047 1707 aaKnown RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 TEX50A0A1B0GTY4 177 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DAPL1A0PJW8 107 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 ARGFXA6NJG6 315 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 H3BP45 60 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 H3BQ85 93 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 K7ERS5 55 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 M0QYV0 167 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 RGS5O15539 181 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 ATP8B1O43520 1251 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 STX10O60499 249 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 GPR75O95800 540 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 NRASP01111 189 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 HRASP01112 189 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 KRASP01116 189 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 S100A6P06703 90 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 SERPINA6P08185 405 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 KRT7P08729 469 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 CGB3P0DN86 165 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 CGB7P0DN87 165 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 CFL1P23528 166 aaKnown RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DDTP30046 118 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 MIPP30301 263 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 RCVRNP35243 200 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 COILP38432 576 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 MP68P56378 58 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms