RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 DIRAS3O95661 229 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 GYPAP02724 150 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 IGKV1-13P0DP09 117 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 MUC1P15941 1255 aaPredicted RBP15.06■□□□□ 0
COMMD4-208ENST00000563220 C4BPBP20851 252 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DCAF12L2Q5VW00 463 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 OR10J5Q8NHC4 309 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 MRGPRDQ8TDS7 321 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 SDSLQ96GA7 329 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DCTN5Q9BTE1 182 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 RSRP1Q9BUV0 290 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 PRR13Q9NZ81 148 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 AUP1Q9Y679 476 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DYSFO75923 2080 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 C12orf77C9JDV5 145 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 TSC22D2O75157 780 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 PIGPP57054 158 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 EDDM3AQ14507 147 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 LY6G6FQ5SQ64 297 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 LDLRAD3Q86YD5 345 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 H1FOOQ8IZA3 346 aaPredicted RBP15.05■□□□□ -0
COMMD4-208ENST00000563220 ZNF843Q8N446 348 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 OR13A1Q8NGR1 328 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 OR1L1Q8NH94 360 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 GAFA1Q96PS6 74 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 CCL13Q99616 98 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 PHB2Q99623 299 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 TMEM106BQ9NUM4 274 aa15.05■□□□□ -0
COMMD4-208ENST00000563220 ARFGEF3Q5TH69 2177 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 A0A1W2PPR1 153 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 MEX3AA1L020 520 aaKnown RBP15.04■□□□□ -0
COMMD4-208ENST00000563220 NPIPB11E5RHQ5 1161 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 MGST3O14880 152 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 IFNA7P01567 189 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 GNRHRP30968 328 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 ANKRD55Q3KP44 614 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 PHLDA2Q53GA4 152 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 ESCO2Q56NI9 601 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 ZNF788Q6ZQV5 615 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 SLC38A6Q8IZM9 456 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 ZNF561Q8N587 486 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 PPP1R35Q8TAP8 253 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 MARVELD3Q96A59 401 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 VRK1Q99986 396 aaPredicted RBP15.04■□□□□ -0
COMMD4-208ENST00000563220 CLEC4MQ9H2X3 399 aaPredicted RBP15.04■□□□□ -0
COMMD4-208ENST00000563220 KCNIP1Q9NZI2 227 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 EPG5Q9HCE0 2579 aa15.04■□□□□ -0
COMMD4-208ENST00000563220 CRYM-AS1A6NIL9 109 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 LGALS8O00214 317 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 C1QL1O75973 258 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 HEXAP06865 529 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 IGFBP2P18065 325 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 KCTD9Q7L273 389 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 SECTM1Q8WVN6 248 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 DBX1A6NMT0 343 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 CD8AP01732 235 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 HBZP02008 142 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 ABCA11PQ4W5N1 156 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 C11orf88Q6PI97 169 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 C1orf87Q8N0U7 546 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 RTN4IP1Q8WWV3 396 aaPredicted RBP15.03■□□□□ -0
COMMD4-208ENST00000563220 ASB13Q8WXK3 278 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 ZNF665Q9H7R5 613 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 SLC2A9Q9NRM0 540 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 OR2W1Q9Y3N9 320 aa15.03■□□□□ -0
COMMD4-208ENST00000563220 PPIAL4EA0A075B759 164 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 TEX13DA0A0J9YY54 714 aaPredicted RBP15.02■□□□□ -0
COMMD4-208ENST00000563220 ODAMA1E959 279 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 LEUTXA8MZ59 168 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 PPIAL4DF5H284 164 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 CCSO14618 274 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 PPIAL4FP0DN26 164 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 HLA-GP17693 338 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 FAM53AQ6NSI3 398 aaPredicted RBP15.02■□□□□ -0
COMMD4-208ENST00000563220 SGPP2Q8IWX5 399 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 FAM216BQ8N7L0 139 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 LURAP1Q96LR2 239 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 SLC5A7Q9GZV3 580 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 PARP12Q9H0J9 701 aaKnown RBP15.02■□□□□ -0
COMMD4-208ENST00000563220 RALYQ9UKM9 306 aaKnown RBP15.02■□□□□ -0
COMMD4-208ENST00000563220 PPIAL4AQ9Y536 164 aa15.02■□□□□ -0
COMMD4-208ENST00000563220 DSCAMO60469 2012 aa15.02□□□□□ -0.01
COMMD4-208ENST00000563220 TRAV38-1A0A0B4J264 116 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 IGHV1-69-2A0A0G2JMI3 117 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 MPC2O95563 127 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 SOD3P08294 240 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 SSTR5P35346 364 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 PPOXP50336 477 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 P2RX3P56373 397 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 CLLU1Q5K131 121 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 ZNF818PQ6ZRF7 136 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 OR5D13Q8NGL4 314 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 OR5M8Q8NGP6 311 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 GALMQ96C23 342 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 CCL28Q9NRJ3 127 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 RDH8Q9NYR8 311 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 OPN4Q9UHM6 478 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 A0A0B4J2A0 478 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 C15orf65H3BRN8 121 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 SIGLEC5O15389 551 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms