RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SOX6P35712 828 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 DEFA6Q01524 100 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 C6orf183Q5T699 404 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 OR52W1Q6IF63 320 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 LDLRAD3Q86YD5 345 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 TMEM86BQ8N661 226 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 OR10A7Q8NGE5 316 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 PHF21AQ96BD5 680 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 RAB3CQ96E17 227 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 SULT4A1Q9BR01 284 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 RHBDL2Q9NX52 303 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 ING3Q9NXR8 418 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 ORC5O43913 435 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 CLPXO76031 633 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 IGHV1-8P0DP01 117 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
USB1-208ENST00000563207 GLP1RP43220 463 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 UBE2E1P51965 193 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 PLA2G7Q13093 441 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 HCP5Q6MZN7 132 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 MZT2AQ6P582 158 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 Q6ZSV7 163 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 DYRK2Q92630 601 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 ARHGAP5-AS1Q96IT6 56 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 CITED1Q99966 193 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 PECRQ9BY49 303 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 ABCG5Q9H222 651 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.72□□□□□ -0.37
USB1-208ENST00000563207 MBNL3Q9NUK0 354 aaKnown RBP12.72□□□□□ -0.37
USB1-208ENST00000563207 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 MGAT4AQ9UM21 535 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 RNF114Q9Y508 228 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 CEPT1Q9Y6K0 416 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 SESN1Q9Y6P5 492 aa12.72□□□□□ -0.37
USB1-208ENST00000563207 TRBV6-6A0A0A6YYG2 114 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 NPIPB11E5RHQ5 1161 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 H3BMQ9 156 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 NPFFO15130 113 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 NAPSAO96009 420 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 PLAC9Q5JTB6 97 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 OR13A1Q8NGR1 328 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.37
USB1-208ENST00000563207 AJUBAQ96IF1 538 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 FAM96BQ9Y3D0 163 aa12.71□□□□□ -0.37
USB1-208ENST00000563207 SMIM31A0A1B0GVY4 71 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
USB1-208ENST00000563207 HIST1H1DP16402 221 aaKnown RBP12.7□□□□□ -0.38
USB1-208ENST00000563207 CDK2P24941 298 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 SAA4P35542 130 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 PROK1P58294 105 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 MRPS15P82914 257 aaKnown RBP12.7□□□□□ -0.38
USB1-208ENST00000563207 SPCS2Q15005 226 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 MOGAT2Q3SYC2 334 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 RTN4RL2Q86UN3 420 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
USB1-208ENST00000563207 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 SLC25A38Q96DW6 304 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 CMSS1Q9BQ75 279 aaKnown RBP12.7□□□□□ -0.38
USB1-208ENST00000563207 C12orf4Q9NQ89 552 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 KCNIP1Q9NZI2 227 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 AK3Q9UIJ7 227 aa12.7□□□□□ -0.38
USB1-208ENST00000563207 TGP01266 2768 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 A0A087X0M5 115 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 A0A1B0GX30 115 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 MFNGO00587 321 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 SPINT2O43291 252 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 CD3GP09693 182 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 PITPNAQ00169 270 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 MIDNQ504T8 468 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 ZNF880Q6PDB4 577 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 ARL11Q969Q4 196 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
USB1-208ENST00000563207 TMEM133Q9H2Q1 129 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 CCDC59Q9P031 241 aaKnown RBP12.69□□□□□ -0.38
USB1-208ENST00000563207 RSL24D1Q9UHA3 163 aaKnown RBP12.69□□□□□ -0.38
USB1-208ENST00000563207 KCNK7Q9Y2U2 307 aa12.69□□□□□ -0.38
USB1-208ENST00000563207 A0A1B0GUS0 222 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms