RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 BPIFCQ8NFQ6 507 aa18■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ERGIC1Q969X5 290 aa18■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 S100PBPQ96BU1 408 aa18■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 MSL2Q9HCI7 577 aa18■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 RBM7Q9Y580 266 aaKnown RBP18■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 TRAV39A0A0B4J263 110 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 HEXAP06865 529 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CEACAM8P31997 349 aaPredicted RBP17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ZNF83P51522 516 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PRR18Q8N4B5 295 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 OOEPA6NGQ2 149 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 WNT9BO14905 357 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 VAMP2P63027 116 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 OR2C3Q8N628 320 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 SLC25A31Q9H0C2 315 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 C11orf1Q9H5F2 150 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ZDHHC8Q9ULC8 765 aa17.99■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 K7EM74 188 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 M0R1B8 84 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PSPNO60542 156 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 MED6O75586 246 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CRYAAP02489 173 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CEACAM6P40199 344 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CD200P41217 278 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 GPHA2Q96T91 129 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 LIN7CQ9NUP9 197 aaKnown RBP17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 UFSP2Q9NUQ7 469 aa17.98■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 A0A1B0GU03 582 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 RNF212BA8MTL3 300 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PROB1E7EW31 1015 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CEBPDP49716 269 aaPredicted RBP17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ID3Q02535 119 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 FAM209AQ5JX71 171 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 OR10Z1Q8NGY1 313 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 OR51H1Q8NH63 302 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 GALMQ96C23 342 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 NARS2Q96I59 477 aaKnown RBP17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PLEKHF2Q9H8W4 249 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PARP11Q9NR21 331 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 FAM212BQ9NTI7 297 aaPredicted RBP17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 KCNS2Q9ULS6 477 aa17.97■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 SEC11BP0C7V7 166 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 EWSR1Q01844 656 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PJVKQ0ZLH3 352 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 MST1LQ2TV78 715 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ZBTB34Q8NCN2 500 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 OR2Z1Q8NG97 314 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 GINS3Q9BRX5 216 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 LUZP4Q9P127 313 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 WRBO00258 174 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 FBXO24O75426 580 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 IGHV3-13P01766 116 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 GLRXP35754 106 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 POLR2GP62487 172 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 SWI5Q1ZZU3 235 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 PXDC1Q5TGL8 231 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 ASCL5Q7RTU5 278 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 FAM90A1Q86YD7 464 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 RPRMLQ8N4K4 120 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 BOLLQ8N9W6 283 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 LRRC29Q8WV35 223 aa17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 LSM10Q969L4 123 aaKnown RBP17.96■□□□□ 0.47
VPS9D1-AS1-202ENST00000562866 CNOT1A5YKK6 2376 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 SSSCA1O60232 199 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 PTBP3O95758 552 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 IGLV2-14P01704 120 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 APOC3P02656 99 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 PSG2P11465 335 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 IL2RGP31785 369 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 RPS23P62266 143 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 TRAT1Q6PIZ9 186 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 RNASE11Q8TAA1 199 aaKnown RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 BSCL2Q96G97 398 aaPredicted RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 SEBOXQ9HB31 216 aaPredicted RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 WFDC1Q9HC57 220 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 LYRM2Q9NU23 88 aaPredicted RBP17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 DUSP13Q9UII6 198 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 PPP1R3CQ9UQK1 317 aa17.95■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 OR8U9P0C7N5 309 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 OR3A1P47881 315 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 CAV2P51636 162 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 KLF3P57682 345 aaPredicted RBP17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 NHLH2Q02577 135 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 CXorf66Q5JRM2 361 aaPredicted RBP17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 CLEC9AQ6UXN8 241 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 OR8U1Q8NH10 309 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 TOLLIPQ9H0E2 274 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 URB1O60287 2271 aaKnown RBP17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 TMEM218A2RU14 115 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 C12orf77C9JDV5 145 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 PITX3O75364 302 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 CFHR2P36980 270 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 RAB5CP51148 216 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 F2RL1P55085 397 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 PAX5Q02548 391 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 COL10A1Q03692 680 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 AESQ08117 197 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 ZNF266Q14584 549 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 MSMO1Q15800 293 aa17.94■□□□□ 0.46
VPS9D1-AS1-202ENST00000562866 NINJ1Q92982 152 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms