RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 SLC25A37Q9NYZ2 338 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 PKIGQ9Y2B9 76 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 R4GN57 208 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 A0A0G2JK05 382 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 H3BUT2 72 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 NBR2O15453 112 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 HYAL3O43820 417 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 CT45A6P0DMU7 189 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 CT45A5P0DMU8 189 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 CT45A7P0DMV0 189 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 KIR2DL2P43627 348 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 TAF10Q12962 218 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 PPP1R1AQ13522 171 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 KIAA0040Q15053 153 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 H2BFWTQ7Z2G1 175 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 MDS2Q8NDY4 140 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 OR5AK2Q8NH90 309 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 FAM110DQ8TAY7 271 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 TBL1YQ9BQ87 522 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 TXNIPQ9H3M7 391 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 KIR2DS1A0A191URI9 304 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 C1QL1O75973 258 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 IL2RAP01589 272 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 PRH1P02810 166 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SRP19P09132 144 aaKnown RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 ZNF286BP0CG31 522 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 ALOX5APP20292 161 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 PPIBP23284 216 aaKnown RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 SNRPGP62308 76 aaKnown RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 DIAPH2-AS1Q14236 149 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 KIR2DS1Q14954 304 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 MSRB3Q8IXL7 192 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 RNF138Q8WVD3 245 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SGK494Q96LW2 274 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SPIN2AQ99865 258 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SPIN2BQ9BPZ2 258 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 DEFB129Q9H1M3 183 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 LINC00597Q9H2U6 94 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 FLRT3Q9NZU0 649 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 SMCHD1A6NHR9 2005 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 NUP205Q92621 2012 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 TRGV10A0A0A0MS01 117 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 FAM95CA0A1B0GW59 222 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 TCRBV5S1A1TA0A578 114 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 RBFOX3A6NFN3 312 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 FAM220BPB1ANY3 271 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 CXCL10P02778 98 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 IFNW1P05000 195 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 TNFRSF1BP20333 461 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 TGIF2LYQ8IUE0 185 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 HOXB13Q92826 284 aaPredicted RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
CDH1-205ENST00000562836 ADOQ96SZ5 270 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 TAAR3PQ9P1P4 343 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 FTSJ1Q9UET6 329 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 ZNF835Q9Y2P0 537 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
CDH1-205ENST00000562836 TMEM129A0AVI4 362 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 DDTLA6NHG4 134 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 H0YIZ8 118 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 HLA-DQB2P05538 268 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 CYBAP13498 195 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 KIR2DL1P43626 348 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 RPS24P62847 133 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 MFGE8Q08431 387 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 RASL11AQ6T310 242 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TTC9CQ8N5M4 171 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 OSR1Q8TAX0 266 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 SSC4DQ8WTU2 575 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 POP5Q969H6 163 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 NDC1Q9BTX1 674 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TMEM126AQ9H061 195 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 LRRC37AA6NMS7 1700 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TRAV36DV7A0A075B6V5 113 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 A0A1W2PQF6 199 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TMEM89A2RUT3 159 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 GRIFINA4D1Z8 144 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms