RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PCDHB16Q9NRJ7 776 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 GFOD1Q9NXC2 390 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 RCC2Q9P258 522 aaKnown RBP7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 GNG12Q9UBI6 72 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 MEGF8Q7Z7M0 2845 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 A0A0A6YYD4 124 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 H3BUI4 141 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 OR2F2O95006 317 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 CD1AP06126 327 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 VSIG8P0DPA2 414 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 SRMP19623 302 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 GZMHP20718 246 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 CRHBPP24387 322 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 HTR2CP28335 458 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 LOXL3P58215 753 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 GLT8D1Q68CQ7 371 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 C11orf88Q6PI97 169 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 C6orf201Q7Z4U5 140 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 LINC00596Q86U02 117 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 ZNF329Q86UD4 541 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 MS4A15Q8N5U1 240 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 NKAIN3Q8N8D7 197 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 MRPL30Q8TCC3 161 aaKnown RBP7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 CREB3L1Q96BA8 519 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 NOL4LQ96MY1 436 aaPredicted RBP7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 GFI1Q99684 422 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 ANKRD60Q9BZ19 345 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 NCOR1P1Q9H4R4 102 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 DUSP21Q9H596 190 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 TAF9BQ9HBM6 251 aa7.54□□□□□ -1.2
NSMCE1-203ENST00000562039 IGHV1-3A0A0C4DH29 117 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 TCRBV4S1A1TA0A5B7 111 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 SMIM30A4D0T7 59 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 NCBP2LA6PVI3 153 aaKnown RBP7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 SOCS1O15524 211 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 PLXNB1O43157 2135 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 SPINT2O43291 252 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 ORC5O43913 435 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 PDCD6O75340 191 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 ATP6V1G2O95670 118 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 UCHL1P09936 223 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 FAM106CPP0CH98 169 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 FUT3P21217 361 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 ZNF134P52741 427 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 FABP5Q01469 135 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 PLA2G7Q13093 441 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 UNC119Q13432 240 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 TCTEX1D4Q5JR98 221 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 HES5Q5TA89 166 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 RNLSQ5VYX0 342 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 AKR1E2Q96JD6 320 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 UQCC2Q9BRT2 126 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 HDHD3Q9BSH5 251 aaPredicted RBP7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 TMEM59Q9BXS4 323 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 CST11Q9H112 138 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 VCX3BQ9H321 246 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 LINC00574Q9H8X3 128 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 PLGRKTQ9HBL7 147 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 SPACA1Q9HBV2 294 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 CHMP1AQ9HD42 196 aaPredicted RBP7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 OR2S2Q9NQN1 319 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 MOB4Q9Y3A3 225 aa7.53□□□□□ -1.2
NSMCE1-203ENST00000562039 FAM90A18PA6NE21 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A16PA6NEW6 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A20PA6NIJ5 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A9PA6NNJ1 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A12PA8MX19 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A5PA8MXJ8 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 GAPDHP04406 335 aaKnown RBP7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A15PP0C7V4 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A13PP0C7W8 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A14PP0C7W9 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 FAM90A24PP0C7X0 464 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 CHATP28329 748 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 BLVRBP30043 206 aaPredicted RBP7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 RAB7AP51149 207 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 RPS27AP62979 156 aaKnown RBP7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 PAX5Q02548 391 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 TPBGQ13641 420 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 C1orf100Q5SVJ3 147 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 C6orf183Q5T699 404 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 C18orf65Q6ZTR6 163 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 C16orf82Q7Z2V1 217 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 CDH26Q8IXH8 852 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
NSMCE1-203ENST00000562039 OR10A7Q8NGE5 316 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms