RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 CCR5P51681 352 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 ABHD14BQ96IU4 210 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 MRPL27Q9P0M9 148 aaKnown RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 SPAG17Q6Q759 2223 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF814B7Z6K7 855 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 DIRC3C9JPN6 131 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 TMEM250H0YL14 139 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF728P0DKX0 622 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 MRPS34P82930 218 aaKnown RBP16.06■□□□□ 0.16
RAB40C-206ENST00000561781 VWA1Q6PCB0 445 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 CALHM1Q8IU99 346 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 C20orf196Q8IYI0 205 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 FAM89BQ8N5H3 189 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 FAM206AQ9NX38 181 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 MSTNO14793 375 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 TNFRSF10CO14798 259 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF823P16415 610 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 CFAP161Q6P656 301 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 CPEB2Q7Z5Q1 589 aaKnown RBP16.06■□□□□ 0.16
RAB40C-206ENST00000561781 ABHD3Q8WU67 409 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 RPRMQ9NS64 109 aa16.06■□□□□ 0.16
RAB40C-206ENST00000561781 A0A1W2PRS3 328 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 A6NJY4 79 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 AQP7P3A6NL99 342 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 H0YGG7 62 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 CST7O76096 145 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 ONECUT2O95948 504 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 TSPOP30536 169 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 ARF3P61204 181 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-206ENST00000561781 MEF2BQ02080 365 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-206ENST00000561781 SNAI3Q3KNW1 292 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 FNDC7Q5VTL7 733 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 TCTEX1D1Q8N7M0 179 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 OR51T1Q8NGJ9 327 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 TMEM56Q96MV1 263 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 SLC46A1Q96NT5 459 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 SAMD10Q9BYL1 202 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF586Q9NXT0 402 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 TMEM56-RWDD3S4R434 201 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 RIF1Q5UIP0 2472 aaKnown RBP16.05■□□□□ 0.16
RAB40C-206ENST00000561781 DCHS1Q96JQ0 3298 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 PRR19A6NJB7 356 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 IFNA5P01569 189 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 GLI4P10075 376 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 PPP1CBP62140 327 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 CDCP2Q5VXM1 449 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 PNKDQ8N490 385 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 TMEM217Q8N7C4 229 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 OR5B3Q8NH48 314 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 FLVCR1-AS1Q8TAF5 88 aa16.05■□□□□ 0.16
RAB40C-206ENST00000561781 VENTXO95231 258 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 EML2O95834 649 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 CEACAM5P06731 702 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 FAHP16930 419 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF20P17024 532 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SMIM21Q3B7S5 101 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 TMEM144Q7Z5S9 345 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 C16orf52Q8NHV5 167 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 PECRQ9BY49 303 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 PBOV1Q9GZY1 135 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 TXNIPQ9H3M7 391 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SOHLH2Q9NX45 425 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SSSCA1O60232 199 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF737O75373 536 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SERPINA7P05543 415 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 ADMP35318 185 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 TSPO2Q5TGU0 170 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 KIAA0895LQ68EN5 471 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 FIGLAQ6QHK4 219 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 OR5AS1Q8N127 324 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 RERGQ96A58 199 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SPIN2AQ99865 258 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 SPIN2BQ9BPZ2 258 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 STARD5Q9NSY2 213 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 WDFY3Q8IZQ1 3526 aa16.04■□□□□ 0.16
RAB40C-206ENST00000561781 A0A1W2PNV4 684 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 AHRRA9YTQ3 701 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 PATE3B3GLJ2 98 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 TGFBR3LH3BV60 316 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 SERF1AO75920 110 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 BLVRBP30043 206 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-206ENST00000561781 BIDP55957 195 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 RPS21P63220 83 aaKnown RBP16.03■□□□□ 0.16
RAB40C-206ENST00000561781 NHLH1Q02575 133 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 FMODQ06828 376 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 PHPT1Q9NRX4 125 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-206ENST00000561781 TP53TG3Q9ULZ0 132 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 HS3ST1O14792 307 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 TOX4O94842 621 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 GYPAP02724 150 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 PSG1P11464 419 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 YPEL3P61236 119 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-206ENST00000561781 SGCBQ16585 318 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.03■□□□□ 0.16
RAB40C-206ENST00000561781 PMS2CLQ68D20 193 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 SIGLECL1Q8N7X8 197 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 Q8N976 141 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 SLC38A9Q8NBW4 561 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms