RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CDCP2Q5VXM1 449 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 MRPL21Q7Z2W9 205 aaKnown RBP9.41□□□□□ -0.9
NEIL1-202ENST00000561643 TMEM45BQ96B21 275 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 SNHG12Q9BXW3 62 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 CALHM2Q9HA72 323 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 MRPS18CQ9Y3D5 142 aaKnown RBP9.41□□□□□ -0.9
NEIL1-202ENST00000561643 H3BQ15 152 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 TK1P04183 234 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 DANCRP0C864 163 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 ASCL1P50553 236 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 SUMF1Q8NBK3 374 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 AHCTF1Q8WYP5 2266 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 HNF1AP20823 631 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 FGF7P21781 194 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 SRPXP78539 464 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 PSMF1Q92530 271 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
NEIL1-202ENST00000561643 DMDP11532 3685 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 NKX2-6A6NCS4 301 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 CELA3AP09093 270 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 GZMBP10144 247 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 DAZAP2Q15038 168 aaPredicted RBP9.4□□□□□ -0.9
NEIL1-202ENST00000561643 TUSC5Q8IXB3 177 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 OR5R1Q8NH85 324 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 ELOVL1Q9BW60 279 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 PRRG4Q9BZD6 226 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
NEIL1-202ENST00000561643 CNOT1A5YKK6 2376 aaKnown RBP9.4□□□□□ -0.9
NEIL1-202ENST00000561643 JMJD7P0C870 316 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 GNRHRP30968 328 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 HAGHQ16775 308 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 NRN1LQ496H8 165 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 DNLZQ5SXM8 178 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 ZDHHC23Q8IYP9 409 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 FAM185AQ8N0U4 392 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 OR4D5Q8NGN0 318 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
NEIL1-202ENST00000561643 PBDC1Q9BVG4 233 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
NEIL1-202ENST00000561643 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 B4GALT7Q9UBV7 327 aa9.4□□□□□ -0.9
NEIL1-202ENST00000561643 FREM2Q5SZK8 3169 aa9.4□□□□□ -0.91
NEIL1-202ENST00000561643 FAM166BA8MTA8 275 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 DLEU1O43261 78 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 SYNGR4O95473 234 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 PGA5P0DJD9 388 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 CEACAM6P40199 344 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FOXG1P55316 489 aaPredicted RBP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 CD81P60033 236 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 DLK1P80370 383 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 ABHD17BQ5VST6 288 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 OR2M7Q8NG81 312 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM173AQ9BQD7 235 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 HES7Q9BYE0 225 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 IL36RNQ9UBH0 155 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 IGKV3D-15A0A087WSY6 115 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 CBY3A6NI87 242 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 ZNF732B4DXR9 585 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 TRDCB7Z8K6 153 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 TRAPPC2LH3BP13 241 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 CDS2O95674 445 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 IL18BPO95998 194 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 SCTP09683 121 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 Q5PR19 223 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 OR2C3Q8N628 320 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 TMEM105Q8N8V8 129 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 HPSE2Q8WWQ2 592 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 HS3ST6Q96QI5 342 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 GPHA2Q96T91 129 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 ZNF703Q9H7S9 590 aaPredicted RBP9.39□□□□□ -0.91
NEIL1-202ENST00000561643 Q9N2K0 584 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FREM1Q5H8C1 2179 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A10PA6NDY2 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A8PA6NJQ4 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A7PA6NKC0 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A22PA8MWA6 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
NEIL1-202ENST00000561643 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms